Pseudomonas fluorescens AU6026, MZ22_RS02895
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU6026 Scaffold_270, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGGCGTGGCCAGCCGTTACGTCGGTTTATACATCGGCGTGTTGCTGTTCTGTCTGGGCCTGTTTCCGCTGATTGGCGCCGTGCTGCAGCAAATCCCCAA GCCGGTGCTGGGCGGCGCGACGCTGGTGATGTTCGGCAGTGTGGCCGCGGCCGGCGTGCGCATTCTCGCCCAGGCACCGCTGGATCGACGCAGCATGCTG ATTATCGCCACCTCGTTCGGTGTTGGCCTGGGTATCGCCGCGCAACCTAACCTGCTGCACCTGATGCCGACACTGGTGCAGAACCTGTTCGACTCCGCCA TCACCAGCGGCGGTATCACCGCCATCCTCCTGTGCCTGTTACTGCCGGAGGCCAAGGCAAGTACCACCGCCGCAAACCACACCCCGGAACGCGACAGCCT GGAACCGCTTTGACGGTTTTATTGCATCAGGACTTGTCTGAGGCTTGAGGGTGGGTTATCTGTGCACACGTCGTCTCTATCGATCAGCACGGAAACCTCC
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| DNA Sequence for Gene |
>MZ22_RS02895
ATGAGCCTCGAAGTTCCTGCCCACAGCAACCACGGCGGTAAACCCGCCAGCCGCATTCGGCAAAAGAATGAACAAGCGATTCTCCAGGCTGCTGAAGATG AATTCGCGCGCCATGGCTACAAAGGCACCAGCATGAACACCATCGCTGCCAGCGCCGGGCTGCCCAAGGCCAACTTGCACTATTACTTCACCAACAAGCT GGGCCTGTACATCGCAGTGCTGAGCAACATCCTCGAACTCTGGGACAGCACCTTCAACGCGCTGACCGCCGAGGATGACCCGGCCGTGGCGCTCGCTCGT TACATCCGCACCAAGATGGAATTCTCGCGCCGCCAACCCCAAGCCTCGCGGATCTTCGCCATGGAGATCATCAGCGGTGGCGAATGCCTCACTGAATATT TCGGCCAGGACTATCGGGCCTGGTTCAGCGGCCGTGCCGCAGTGTTCCAGGCGTGGATCGACGCCGGCAAAATGGACCCCGTCGACCCCGTGCATCTGAT CTTCCTGCTGTGGGGCAGCACCCAGCACTACGCTGACTTCGCCACCCAGATCTGCCGCGTCACCGGTCGCACCAAGCTGACCAAGCAGGACATGGAAGAT GCCGGCACCAACCTGATCCATATCATTCTCAAAGGCTGCGGCATCAAGCCAGCCCTATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGAAGCGATTTATGTCTTTTACGCTCACCGGTTTTTGCGAGTTTCGTGAAGAAATACGCAAGAGCCGCTTTATCACCGTGGCGGCGCCGATTACCAGCC CGCAGGACGCCCAAGCGTTTTTCGAGCAACACAGCGACCTGAACGCCACGCACAACTGCTGGGCCTGGAAGCTAGGCGATCAATACCGCAGCAGCGATGA CGGCGAACCCGGTGGCACAGCCGGGCGCCCGATCCTCGCGGCCATCGAGGCCCAGGGCTTTGATCAGGTGGCCGTATTGGTGATCCGCTGGTACGGCGGC ATTCAACTGGGCACGGGTGGCTTGGCCCGCGCCTATGGCGGCGGGGCCAATAAATGCCTGCAAAATGCCGAGCGCATCGAGCTGATCAGCCGCGTACCTC TGAGCTGCGCCTGTGGCTTCTCCGAGCTGAACCTGGTGAAGCTGCGCGTCGCTGAACTCGGCGGGATTGTGGTGGAAGAAACCTTCACCGCCAACGGCGT
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| Amino Acid Sequence |
>TetR family transcriptional regulator
MSLEVPAHSNHGGKPASRIRQKNEQAILQAAEDEFARHGYKGTSMNTIAASAGLPKANLHYYFTNKLGLYIAVLSNILELWDSTFNALTAEDDPAVALAR YIRTKMEFSRRQPQASRIFAMEIISGGECLTEYFGQDYRAWFSGRAAVFQAWIDAGKMDPVDPVHLIFLLWGSTQHYADFATQICRVTGRTKLTKQDMED AGTNLIHIILKGCGIKPAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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