Pseudomonas fluorescens AU6026, MZ22_RS10780 (ampC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU6026 Scaffold_260, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGATCAACGGGTTGCGGCTGTGAAAATCCGCTAGGCGTGGCAACAACCAGCCCACCGCAAAGGTGCCGACCGCCCCCACCGTCAGGACTTCACGGTAAT GCCCGCCTTCAAATTGATCCAAGGTCAGGGCAATACGGTCGAAGGCGTCACGCAGCACGGGCAGCAGGGATTCGCCTTCGCTGGTGAGCATCAAGCCCCG TGGCAGGCGCTTGAACAGCGTGACGTTGAGTTGCGCTTCGAGACTTTTGACCTGATGACTGACCGCCGCCTGGGTCACGCACAGCTCAATGGCCGCACGG GTAAAGCTCAAATGGCGCGCCGACGCTTCGAAAGCGCGCAACGCATTGAGCGGCAGGTGGGAACGCAACATGGCTTGACCCAAATTTTTCTAATGACAGG TGCGAGATATCATCGTTTGCCGGCGCCCGGAAATCCACCTACATTTGCCACGCCTGCGCAGGTTCCGATCGTCATTGCCTTATTTACATGGAAGCGAACC
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| DNA Sequence for Gene |
>MZ22_RS10780
|ampC
ATGAAACACACCCTGAAAAAATATGCGGTTTCAGCCTTGTTGTTCGGCGCCGGCAGCTGCATGGCAGCCACCGATATGCGCCAGGTCGTGGACAGCCACG TCACCCCTCTGATGAAACAGCAAGGCATCCCGGGCCTGACGGTCGCGGTCGTCCAACACGGTAAGGTGCAATACTTTAACTACGGCGTCGCCGCCAAAGA CACCCAGGCACCCGTCACCGAAAACACCCTGTTCGAAATCGGCTCAGTGAGCAAAACCTTCAACGCCACCCTCGGCGGGTATGCCCAGGCCATCGGCAAG CTCAAGCTGTCGGACATGACCAGCCAACATCTGCCCGTCCTGGCTGGCAGCGCGTTCGATCGCATCAGCCTGCTGCAACTGGCCACTTATACCGCCGGCG GCCTGACGCTGCAGTTTCCGGATGCCGCCGACAGTGCAACCACCATGATGGATTACTTCCAGCATTGGAAACCCACTTATGCGCCGGGGGAACAACGCCT TTACTCCAACCCCAGCATTGGCCTGTTCGGTTACGTGACCGCAAAAAGCCTGGGCCAGCCTTTCACCGTCGCCATGGAAAAAACCCTGCTGCCCAAGCTG GGCTTGACCAATACCTATACCCGCGTCCCCGCCGACAAGGCTGGCCAATACGCCCAGGGCTATGACAGCCAGCAGAAACCGGTACGCGTCAACCCTGGCG CCCTGGACTTCGAAGCCTACGGCCTCAAGAGCAGCAGCCAGGACCTGGCCCGCTACGTGATCGCGAACATGCACCCGCAAACCCTGGAACAACCGGTGCA ACAGGCCATTGCCACCACTCACGCCGGCTACTACACCGTCAACGGCATGACCCAGGGGCTGGGCTGGGAACGCTACCCCTACCCCATCGGCCTGCAAGCG TTACTGGACGGCAACTCCACACCGATGGCGATGGAGCCGCACAAGGTCACCTGGCTGACACCCGCCCAGGCCGAGCCGGCCAACGTGCTGTACAACAAAA CCGGGTCCACTGGCGGCTTTGGTGCTTACGTGGCGTACGTGCCAAGCAAGGACATGGGGGTGGTGATCCTGGCGAACCGGAACTACCCGAATGCCGAAAG GGTGAAAGTAGCGCACGCGATCTTGAGTGCGATGGACCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCCGCCATCGCAGGCAAGCCAGCTCCCACATTTGGATCGCGGCGCGTCAGTTAGATCAGCGTCCGCCGTTGGGTAGTCACGGGAGCAAGCTCCCTCGCC ACAGGGCCTGCGTCGTCCCTGAGTTGTGTAGATACCTATGCCCCGATGAGGGAGTGTCTGACTCATCGCCATCGGGGCAAGCCCCCTCCCACCCTACATT CCGAGCCACTGCGGCAGCGCCAGGGAAATGAACGGCAAGTACGTCACCATGATCAGGAACACCAACAGGATCATCAGCCACGGCATCGCCGCGCGAATAG TCTGCCCCAATGTCAGCCCGGTCACCGCCGAGGTCACGAACAGGTTCAGCCCCACCGGCGGGTGCACCAGGCCGATTTCCATGTTCACCACCATCACGAT CCCCAGGTGAATCGGGTCGATCCCGAGCTTCATCGCAATCGGAAAAAAGATCGGCGCCAGGATCAGCACAATGGCCGAAGGCTCCATAAAGCTGCCGGCA
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| Amino Acid Sequence |
>beta-lactamase/D-alanine carboxypeptidase
MKHTLKKYAVSALLFGAGSCMAATDMRQVVDSHVTPLMKQQGIPGLTVAVVQHGKVQYFNYGVAAKDTQAPVTENTLFEIGSVSKTFNATLGGYAQAIGK LKLSDMTSQHLPVLAGSAFDRISLLQLATYTAGGLTLQFPDAADSATTMMDYFQHWKPTYAPGEQRLYSNPSIGLFGYVTAKSLGQPFTVAMEKTLLPKL GLTNTYTRVPADKAGQYAQGYDSQQKPVRVNPGALDFEAYGLKSSSQDLARYVIANMHPQTLEQPVQQAIATTHAGYYTVNGMTQGLGWERYPYPIGLQA LLDGNSTPMAMEPHKVTWLTPAQAEPANVLYNKTGSTGGFGAYVAYVPSKDMGVVILANRNYPNAERVKVAHAILSAMDQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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