Pseudomonas fluorescens AU6026, MZ22_RS15280
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU6026 Scaffold_240, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGGCGACATTGGCCAGGCTTGCCAGTACACAGAGGGCCAGAGGCGCTTTCATGGAGTCGAATCCTTGGGGCTCGGTTGAAGCAGCCATAATGCCCGTT TTGGTAGGAACGAGCTTGCTCGCGGAAAAGCTGTGTGCGCCGCTGTGAACCAGGCACCCCGCGTTATCGTTAACGATCTTCGCGAGCAAGCTCGCTCCTC CAGACAGAATGTTTAGCCAAACTGCAACCAAACTCCATCAAGCCTGAATTTACCCGTGTAACCTCGCGTGTGACGCTCAAGTCTTTCTATCACTGTGAAT CGCGCATGCACGCTTGCCCCGACACTCACACCGCGACATTGCCGTCTGCGCTTGCGTTCTGGGCCTTGTTCCATTGCCGACACGCGCGCCCGCCAGATAC CTCTCTCCTACGTTGATCTACCCCAAGGATGACGCGCACCTGTGCGCATCTGCCCGGCGGCGCCTGCGCGCTTGCCTGACGCAAACGTATGAGAATTCCC
|
|
| DNA Sequence for Gene |
>MZ22_RS15280
ATGAGTGTTTTTGCCAGCCTGCATGAAGCCCAGACCTTCCTTGAACAGAACCCCGACATTGAGATGTTCGAGCTGTTTATCCTCGATAACAACGGCGTAC CGCGCGGCAAGCTGCTGCACCGCGACGAACTGCTGGCGGTGTACGAAAGTGGCCGGCCTCTGCCCAGTACCATCCTCGGCCTGACCATCAATGGCGATGA CGTAGAAAACTCCGGGCTGGTCTGGGAGGTGGGGGATATTGACTGCCGCGCCTACCCGATCAGCGGCAGCTTGCAGCGCATGCCATGGCGCTTGATCCCC ACCGCAGCGGTGCAAGTCAGCATGCACCCCACCGAAGGCCTGCCCGCCACCGTGGCCGACCCCAGGCACCTGCTGGCCAATGTTATCGAGGCGCTCAAGG CCGACGGTTATTACCCGGTGATGGCGGCGGAGCTGGAGTTCTATCTGCTCGACCAGAAGCCCGACAGCAACGGCCGCCCGCAACCGGCGCGGGATGTGGA TGGCAATCGCCCGCGTTCGACGCAAGTCTACGGCCTGCGCGAACTGGAGCAGATCGAGCCGTTTCTTGCCGACCTCTACAGCGCCTGCAAACTGCAAGGG ATTCCGGCGCGCACAGCTATCTCCGAGTACGCGCCGGGCCAAGTGGAAATCACCCTCGAACACCGCACCGACGCGCTGCAGGCGATGGACGAAGCCGTGC GCTACAAACGCCTGGTCAAGGGCGTGGCGCACAAACATGGAATGACCGCCTGTTTCATGGCCAAGCCGTTCGACGACCTGGCCGGCACCGGTATGCACAT GCACGTCAGCCTGGCCGATGCCCAGGGCAATAACCTGTTTGCCAGTGAAGCGACCGACGGCACGCCACTGCTGCGCCAGGCCGTGGGCGGCATGCTCAGT ACCTTGCTCGATTCACTGTTGATGTTCTGCCCCAACGCCAACTCTTATCGACGCTTCCAAACCAACAGCTATGCGCCGCTCGCTGCCACCTGGGGCGTGG ACAACCGCACCGTCAGCCTGCGCGTGCCCGGTGGCCCGGCTCTATCCCGGCATATCGAACACCGCATCTGCGGTGCCGACGCCAACCCCTACCTGGCGGC TGCTGCGATCCTGGCCGGGATTCATCGAGGCATCCGCGAACAGCTCGACCCTGGCGCCCCGGTGCAAGGCAACGGCTACGCCCAGGCCAAGGAACTGCTG CCCACCGACTGGCTGACCACCTTGCGCGCGCTGGAAACCTCCCGCTGGGCACCGGATGCGTTCGGGCGCGAATTCCTAAGCGTTTACCTGGCGGTCAAAC GTGCCGAATACCGCCAGTTCATGGGCGAGGTGGGGGAGCAGGATTGGCGGTGGTACTTGCATCAAGCGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGGTTTTAGCGGGGTGGGCTTTCGACCTTTTTTTCACGTTGCGAAGGTTAAGCTGCGGATCAAGGTCGTTCACTACCGTTTCATTCACATGAGCCCGCG ATGTCGCCACAACCTCCATCCTCCATCGAGACCGAATTCACCGAGCGCTATGACCGTGAGCATGCCAGGGGCTGTGGCGACCCGCGTCCGCCCAGGCTGT TGCAGCGCCTGTCGGCGTGGCGCGATGCGCGGTTGGTACGCCAGGCCCTGAAAGTGGCGGGCGAGCCAGGGCTTATCCTCGACCTGGCGTGTGGTTCCGG GCGCTTCTGGCCGGTGCTGGCCGAACACGTCAACCGTGTGATCCTGGCCTCGGACAACTCCCAGGCGATGCTCGATCACGCGCGCACCCATCACCCGGGC GCGTTGCTCAAGCGTGTCAAAACATTCCAGGGCTCGGCGTTTTCCATTGGCCTTTCGGCGAATGCGGTGGACTGCATTTTCTGCCTGGATTTGTTTCGCC
|
|
| Amino Acid Sequence |
>glutamine synthetase
MSVFASLHEAQTFLEQNPDIEMFELFILDNNGVPRGKLLHRDELLAVYESGRPLPSTILGLTINGDDVENSGLVWEVGDIDCRAYPISGSLQRMPWRLIP TAAVQVSMHPTEGLPATVADPRHLLANVIEALKADGYYPVMAAELEFYLLDQKPDSNGRPQPARDVDGNRPRSTQVYGLRELEQIEPFLADLYSACKLQG IPARTAISEYAPGQVEITLEHRTDALQAMDEAVRYKRLVKGVAHKHGMTACFMAKPFDDLAGTGMHMHVSLADAQGNNLFASEATDGTPLLRQAVGGMLS TLLDSLLMFCPNANSYRRFQTNSYAPLAATWGVDNRTVSLRVPGGPALSRHIEHRICGADANPYLAAAAILAGIHRGIREQLDPGAPVQGNGYAQAKELL PTDWLTTLRALETSRWAPDAFGREFLSVYLAVKRAEYRQFMGEVGEQDWRWYLHQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|