Strain | Pseudomonas fluorescens strain AU6026 Scaffold_190, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCAAGTTGCTGCTGGCGGGCCAGGACCTGGCCACTATCAGCAATGCGCAAATTCCATTCCTGCGCCGCCAGATCGGCGTGGTGTTCCAGAACCACCAGT TGCTGTTCGACCGTACGGTGTTCAACAACGTGGCCCTGCCGTTGCAGATCCTCGGGTTGTCCAAGGCCGAGATCGTCAAGCGCGTGGACTCGGCCCTGGA GCGCGTGGCGTTGTCGGACAAGACCGACCTCTTCCCCGGCGACCTGTCCACTGGTCAGCAACAGCGTGTCGGTATCGCCCGCGCCATCGTCCATCGCCCG GCTTTGCTGCTGGCGGACGAACCCACCGGTAACCTCGACCCGCGCCTGGCGGCCGAGATCATGGGGGTGTTCGAAGACATAAACCGCCTGGGCACCAGCG TCTTGATCGCCAGCCACGACCTGGCCCTGATTGCCCGTATGCGCCATCGCATGCTGACCCTGCAACGCGGCCGCCTGATCGGCGATGGGGAGGCGGGCGT
|
|
DNA Sequence for Gene |
>MZ22_RS25015
ATGAGTGCTACACGCAGCCCTAAAGTATCCGAACGGGTAGCTCCGAAGCCGGCCGACCCGCAACCGAAAAAGAAAAAACACGACGAAGACGACGGCCCGG ACTTCGGCACCCTGGTGCACGCCTGGATCGAAAGCCACCGCGCCAGCCTGCTGGACAGCCTGCGGCGCCTGGGCAAGCAGCCGATCGGCAGCTTTTTCAC CTGCCTGGTCATGGCCGTGGCCTTGAGCCTGCCGATGGGCTTGTCGCTGTTGCTTAATAACGTGGAGCGCCTGGGCGGTTCCTGGCAGCGGGCGGCGCAG ATTTCGCTGTACCTGAACCTGGACACCAGCAGCAAGGAAGGCGAAGCGCTGCGTGACGATATCAAGAACATCCCGGGGGTAGCCGAGGCCGAGTACATCA GCCGCGACCAGGCTCTCGAAGAGTTCCAGCAGCAATCGGGCCTGGGCGAGGCGCTCAAGGAGCTGCCGCAGAACCCGCTGCCGGGCGTGGTGCTGGTAAC CCCGAACGAGGTCGACAAACCGGCGCTGGAAGCCCTGCGACAAAAACTCGCAGAGATGCCGAAGGTGCAACAGGCGCAACTTGATCTAGTCTGGGTAGAG CGCCTGGCCGCGATCCTCAAGCTGGGCGACCGCTTTGTGTTCGGCCTGACGGTGTTATTAGTGTCTGCATTACTTTTGGTGATAGGTAATACCATTCGTC TTCATATTGAAAACCGTCGCACCGAGATAGAAGTGATTAAACTGGTGGGCGGCACAGACAGCTATGTGCGTCGGCCTTTCCTGTACATGGGCGCGCTGTA TGGCCTGGGTGCGGGGATCTTGTCCTGGGGCGTACTGGCGTTTGGCCTGGATTGGTTGAACGACGCGGTTGTCGGCCTGGCGGGGCTCTACGGCAGTGAT TTCGCGTTGGCCGGTGTGCCGGTAGCCGATGGTCTGAGTCTCTTGCTTGGCGCGGTGTTGTTGGGGTATATCGGTGCGTGGATTGCGGTGGCACGGCATT TACGTGAGCTGGCGCCGAAGTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TTAATGCCAGATTAATGTGGTTTCGTTTGTATTGACCGTATCAGCGGTTTAGGGAACTTGTCCTACGGTTCCCAGGTCAATTTTCGCAGTGCTGAACTGC ACGAGTTATGTGAGTCGGAGGTTTTTTCGTATGACCACTTCTTTGCAACCTGCTTATGCCTTGGTCCCGGGTGCGAACCTGGAAGCCTATGTGCACACGG TCAACAGCATTCCATTGCTGACGCCCGAGCAGGAGCGTGAACTGGCCGAGAGTCTCTACTATGAGCAGGATTTGGGGGCGGCTCGGCAGATGGTGCTCGC CCACCTGCGTTTTGTCGTACATATCGCCCGTAGCTATAGCGGCTACGGTCTGGCCCAAGCCGACCTGATTCAGGAAGGCAACGTAGGCCTGATGAAGGCT GTAAAGCGCTTCAACCCTGAAATGGGCGTGCGCCTGGTGTCGTTTGCCGTGCACTGGATCAAGGCGGAAATCCACGAGTTCATCCTGCGCAACTGGCGCA
|
|
Amino Acid Sequence |
>cell division protein FtsX
MSATRSPKVSERVAPKPADPQPKKKKHDEDDGPDFGTLVHAWIESHRASLLDSLRRLGKQPIGSFFTCLVMAVALSLPMGLSLLLNNVERLGGSWQRAAQ ISLYLNLDTSSKEGEALRDDIKNIPGVAEAEYISRDQALEEFQQQSGLGEALKELPQNPLPGVVLVTPNEVDKPALEALRQKLAEMPKVQQAQLDLVWVE RLAAILKLGDRFVFGLTVLLVSALLLVIGNTIRLHIENRRTEIEVIKLVGGTDSYVRRPFLYMGALYGLGAGILSWGVLAFGLDWLNDAVVGLAGLYGSD FALAGVPVADGLSLLLGAVLLGYIGAWIAVARHLRELAPK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|