Pseudomonas fluorescens AU6026, MZ22_RS09160

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU6026 Scaffold_180, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTTCGCCTGACGATCGAAGGGTTGCAACAAAGTTTGCGCACCCGTGACGAATTGAATAACGAGTTGGATACAGCGCCGTTCGGCAGCCATGGTGTGGGCC TTAATCCCTTGAAAGCGTGTAGCGACATCGATGCTGCGGTAGCTGCGATGTTGGATATAAGTGCGTTAGGCCAGATGCCCGCTGTACGGGCTATCACCCA GGCTCACCGGGAACTGCAAGCGCATCAGGTCGCACTGTTGGCCGCCTGTCGAAGCACCTTGCGCAACGCCCGTGCGGCCTTTGAGCCCAGCTATCTGTTG GGATGCTTCGAGTCCTCGGGCAAGTCGGTCGGGTTTTTCTCGGATGGTGGGCATTGGCGTGCGTACCAGCGTCATTACCAGCGTCTGGTGGCGCAAGAGC GATTGAATGATCGTCCTTTGGGGGGCGACTTCGCCAAGGCCTATGAGGAGCAGGTGCGCCTGATCTCCAGCCTGCATATTGATTTTCCAGGATAATGCTC
DNA Sequence for Gene
>MZ22_RS09160
ATGTACCGAGTCACCCTTGCTTTGCTGTTGCTCATGTTCGGGCTATTGACAGGTTGCAGCGCCGCCTCGCCTTTTTCTAAGCTGACCAAGCTAGACATGG CGCTGACCGCCAGTGAACTCGTCAACCCGGATCTGCATGGCCGCCCCTCGCCAGTTGTGGTGCAGTTGATTGAACTGCGCCAGGGCGTCGCTTTTGAACA TGCCGACTTCTTCGGTCTGTATGGCAATGCGCAGCAGACGCTGTCCAAGGACTGGGTAAACAGCGACGAACTTGAATTGCGCCCTGGGGACCGCCTGGGG CTCAAGCTTCGTATCGGACCTGACAGTCGTTTCGTGGGGGTGCTGGCGGCTTATCGAGACCTGCCCAATGTCCAGTGGCGGCTGCTGATCCCGCTGACCG TGCAACAACGTAACCGTGCTGATCTGGTATTGGATCAGACCGGTATACGCGTTGCTGGCTCACTCGCCGGCCTGGAGGCGCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CATGCAGGCTCAGAAAGTTATCTGGCAAGAAGGCATGCTGTTGCGGCCACAGCACTTGCAGCACAACGACCGTTATTATCATCAACAACTCACCCAGACG CGCTTGTTGGGCAGCGATACCTGGGGCTTGCTCACGCTGGAACTCAATTTGCAGTACCTCAAGCTGGGCAAGCTGGTGGTCAACCAGGCCAGCGGCGTTT TGCCGGACGGTAGCCTGTTTGAGTTGAGCCCCGGCATGGAACCTCTGGTGTTGCAGGTACCCACCGACACGGGCAGACAAGGCGTTTTCCTCGCGCTCCC GTTGGCCAGTGGCAGTCACCTTGAAGTTCGCCAGCCAGGACAGAGTGATGTGCTGGCACGCTACGTCAGCTGCGAAGTGGAAGTGGGAGATGCCAATGCG GGTGTGGATACGCGTTGCCGGATCAACTGCGCACGTCCCGACTTACGTCTTCTGTTGGGCGAACACCCGCATGACGAGCACTTCGTCAAACTCAAGATCG
Amino Acid Sequence
>type VI secretion protein
MYRVTLALLLLMFGLLTGCSAASPFSKLTKLDMALTASELVNPDLHGRPSPVVVQLIELRQGVAFEHADFFGLYGNAQQTLSKDWVNSDELELRPGDRLG LKLRIGPDSRFVGVLAAYRDLPNVQWRLLIPLTVQQRNRADLVLDQTGIRVAGSLAGLEAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site