Pseudomonas fluorescens AU6026, MZ22_RS14135
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU6026 Scaffold_160, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCCTGCGCTCCTTTGCCCGGCGCGGTGACGACCAGGGCGAAGCCAGCCTCGGCAAGGCCGTGGACGCCGCGTTCCAGGTGCTCGGCGCGCGCCTGGACA GCCTGCCGTTGACCGTGCACCGTGACTTTGCCAACGCCCAATTGCAGATCGACCAGACCCGCCTGGAGCAGATCCTGGTCAACCTGATCGGTAACGCGCT CGATGCGATGCAGGCCCAAGCAGTGCCGCAACTGTGGCTGGAAGGCCAGAGCGGCGACGGCAAATACCGCCTGCTGGTGCGTGATAATGGCCACGGCATC GACCCCGAAGCACGCAAGCATTTGTTCGAACCCTTCTTTACCACCAAGCCCGGCGAACAAGGCCTGGGCCTGGGCCTGACCCTTTCCGCCAGCCTCGCGG CCGCCACCGGCGGTAGCCTTGCCGTGGAACATCCGGCCAATGGTGGTACCGCCTTTGTCCTGAACCTGCCATTGGTGGGCGCTCAACGAGCTGAGTCGAC
|
|
| DNA Sequence for Gene |
>MZ22_RS14135
ATGAATACACAAGCCCAAGACCTTACCGTCCTGATCGTCGAAGACGACCCCCATGTACTGCTCGGTTGCCAGCAAGCATTGGCGCTCGAAGACATCACCA GCGTCGGCGTGGGCAGCGCCGAAGAAGCGCTCAAGCGCATCGGCGAAAACTTTGCCGGCATCGTCATCAGCGATATCCGCCTGCCGGGCATCGATGGCCT GGAACTGCTGACCCGCCTCAAGGCCTTGGATAAAAGCCTGCCGGTGGTGTTGATCACCGGGCATGGCGATATCTCCATGGCGGTGGGCGCCATGCGTAAC GGCGCCTACGACTTCATGGAGAAACCCTTCTCGCCCGAACGCCTGGTGGACGTGGCACGCCGCGCCCTGGAACAACGCGGGCTGGCGCGGGAAGTCTGGT CGCTACGCCGGCAACTGGCCGAACGCGACTCACTGGAAGGCCGCATCATCGGCCGCTCGCCGGCCATGCAAAACCTGCGCGAACTGATTGCCAATGTCGC CGATACCTCGGCCAACGTGCTGATCGAAGGCGAGACCGGCACCGGCAAGGAACTGGTCGCGCGCTGCCTGCATGATTTCAGCCGGCGCCATACCCACCAG TTCGTCGCCCTCAACTGCGGTGGCCTGCCGGAAAACCTGTTTGAAAGCGAGATTTTCGGCCACGAGGCCAACGCCTTCACCGGCGCCGGCAAACGTCGCA TCGGCAAGATCGAGCATGCCCATCAAGGCACGCTGTTCCTCGATGAAGTAGAGAGCATGCCGATCAACCTGCAGATCAAATTGCTGCGGGTGCTGCAAGA ACGTACGTTGGAACGCCTGGGTTCGAACCAGAGCGTGGCGGTGGATTGCCGGGTAATCGCTGCCACCAAGTCCGACCTCGACGAGTTGAGCCGCGCCAGC CAGTTCCGCAGCGACCTGTACTACCGCCTCAACGTCGTCACCCTGGAACTGCCGCCTTTGCGCGAACGGCGCGAAGACATCCTGCAACTGTTCGAACACT TCCTGCAGCAATCGTCGCTACGCTTCGACCGGGCGGTGCCGGAGCTGGACAACCAGACCCTATCCAGCCTGATGAGCCACGACTGGCCAGGCAACGTGCG TGAGCTGCGCAACGTCGCCGAACGTTTCGCCCTCGGCCTGCCCGCCTTCAAGAAAAGCGGCGCCGGCAGCGGCAACCAAGGGGTTGCCTTTACCGAGGCG GTGGAAGCCTTTGAGCGCAACCTACTCAACGATGCCCTGCAACGCAGCGGCGGGAACCTGACCCAGGCCAGCCAGGAACTGGGGATGGCCAAGACCACCC TGTTCGACAAGGTCAAGAAATACGGGTTGAGTCACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGGATCTGTTCCTGAAGGCTGCACTTGGCGCCGCAGTGGTGCTGATCCTGGCGGCGCTGGCCAAGACCAGAAACTATTACATCGCAGGCTTGGTGCCGCT GTTTCCCACTTTTGCGCTGATCGCCCATTACATCGTCGGCAAAGGCCGAACGGTTGCGGACTTGAAGACCACGATCCTGTTCGGGATGTGGTCGATCATT CCGTACTTTGTGTATTTGGCGACGCTGTATGTGATGGTCGATCGGCTGCGGTTGGAGGCATCGCTGGCAGTCGCCGCCGTGGCCTGGTTGATGGCCGCGA CGGTGTTGGTCAGCGTGTGGGTACGCCTGCACACCTGACGCAACACGGCAGATTGTTCCCACGCTCCCGCGTGGGAATGCAGCCAAGGACGCTCCGCGTC CACACGCGTGACGCAGAGCGTCACCAGAGGCACTCCCACGTGGAGCGTGGGAGCGATCATGAGTTACCACACTCAGATCAGCGCACGATCTTGTCGACCT
|
|
| Amino Acid Sequence |
>Fis family transcriptional regulator
MNTQAQDLTVLIVEDDPHVLLGCQQALALEDITSVGVGSAEEALKRIGENFAGIVISDIRLPGIDGLELLTRLKALDKSLPVVLITGHGDISMAVGAMRN GAYDFMEKPFSPERLVDVARRALEQRGLAREVWSLRRQLAERDSLEGRIIGRSPAMQNLRELIANVADTSANVLIEGETGTGKELVARCLHDFSRRHTHQ FVALNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHAHQGTLFLDEVESMPINLQIKLLRVLQERTLERLGSNQSVAVDCRVIAATKSDLDELSRAS QFRSDLYYRLNVVTLELPPLRERREDILQLFEHFLQQSSLRFDRAVPELDNQTLSSLMSHDWPGNVRELRNVAERFALGLPAFKKSGAGSGNQGVAFTEA VEAFERNLLNDALQRSGGNLTQASQELGMAKTTLFDKVKKYGLSH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|