Pseudomonas fluorescens AU6026, MZ22_RS23570

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU6026 Scaffold_140, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTTGTCCGTCGAAGCCGCGCCGGCGGCCAAGCAGGACATGCCTAACGCGCCAGTGGTACAGAGCCTGGACGGCCAGCACATTCGCCTGCCGGGGTATATC GTGCCTCTGGAAGTCAGCGAAGAAGGCCGCACCACGGAGTTTCTGCTGGTGCCGTATTTCGGCGCATGCATACACGTGCCCCCACCGCCATCGAACCAGA TCGTGCATGTTAAAAGTGAAGTCGGGGTGAAGCTCGATGAGCTGTATCAACCGTACTGGATCGAGGGTGCGATGCAGGTCAAGCCATCGTCCAGCGAGTT GGCGGACGCTGGCTACCAGATGGATGCACAGAAGATTTACATGTACGAGCTTGAGGAATAACTCCACACACCGAAGCTCCCACAGGTTTAGATCAGTGGC GCAAGTGACTGATCACCCTTTCATTGAGCTGAGTCAAAAGACCGTACGGAACGATCTTTACCATTGGACGTACAACTTTTAAACGTCCTTTGGAGCTCCC
DNA Sequence for Gene
>MZ22_RS23570
ATGAACAAGTCTCTGCTCGGCGCGTCCCTCTTCGCGCTCGCCCTCGTCGCCCCCGTCGCCCACGCTCACCAGGCGGGCGATATTCTGGTTCGCGCCGGTG CAATCACCGTGAACCCGAAGGCCGACAGCAGCAGCGTCAAGGTTGACCAGGGCCCATTGGCCGGCACCAATCTGGGCGGCAAGGCGACCATGAGCAGCGA CACCCAATTGGGCTTGAACTTCGCCTACATGATCACCGACCACGTCGGCATCGAATTGCTCGCGGCCACGCCGTTCGAGCATGACGTGAAGATCAAGAAC ACCGCCCTGGGCGCCGCCAATGGCAAGCTCGGCACGCTGAAGCACCTGCCGCCGACCTTGAGCGTCGTGTACTACCCGCTGGATCACAAATCCGCGTTCC AACCGTATGTGGGCGCCGGTATCAACTACACCTGGATCTACGACGAGCACGTGGGCAGTCGCGCCGAGCAGGCTGGTTTCAGCAACTTCAAGGCCGAGAA CTCCTGGGGCTGGGCTGCACAGATCGGCGCCGACTACATGATCAACGACAAGTGGATGATCAACGCCCAGGCGCGCTACATCGACATCAGCACCAAAGCG ACTGTGGATAACAACGCGCTGGGCCAGGGCACTCGGGCCAAGGTCAATGTGGATGTAGACCCGATGGTTTACATGGTGGGTATCGGCTACAAGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTCGGTTTAAGCCACACCGCATTACCCATGTGGGAGGGGGCTTATGTGGGAGCCGGGCTTGCCCGCAATGCAGACACCACGGTGTATCAGTGATACCCA GGTGATGCTATCGCAGGCAAGCCAGCTCCCACATAAGTCCCCTCCCACATTTTGGTTTTGAGGGTGTCAGCTATGGCGGTAGAAGCGATCCAGTAGCGCC GGCAAACCTGCCCGCCATGCCCGTGGTTTGATGCCAAAGGTGTGGAGGATTTTCTTGCAGGCCAACACCGCATGCTGCGGTTCATCCGCCGCATCCGGCC GCGCTGCGTGAGCCTGGGCGGTGGGGGACTCGATGGTCAGCGGATGGAAGTTGCGCGCTTCAGTCAGAATCGCCTGCCCCAGCGCCAACGGGGTAGTCGC CTCGTGGCCGGCGTAGTGGTAGGTGCCCCATAGCGGCGCAGCGCAATCGAGTTGCTTGAGCACCGAGATGATCACCCGCGCCGCATCGTCCACCGGCGTC
Amino Acid Sequence
>outer membrane protein W
MNKSLLGASLFALALVAPVAHAHQAGDILVRAGAITVNPKADSSSVKVDQGPLAGTNLGGKATMSSDTQLGLNFAYMITDHVGIELLAATPFEHDVKIKN TALGAANGKLGTLKHLPPTLSVVYYPLDHKSAFQPYVGAGINYTWIYDEHVGSRAEQAGFSNFKAENSWGWAAQIGADYMINDKWMINAQARYIDISTKA TVDNNALGQGTRAKVNVDVDPMVYMVGIGYKF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site