Pseudomonas fluorescens AU6026, MZ22_RS23115
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU6026 Scaffold_140, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCAATGGACCCCGCCACCTGCGCAGCATGCGCCTGATACCGTGGTGGTGCCTCACGCGGCAGCGGGCGCCTCCATGGCCGGTGGGCAATACCTGCAGGT CGGCGCTTTCGCCAACCCGGATGCGGCAGAACTGTTAAGGTCCAAGCTCAGCGGCATGGTCAGCGCGCCGGTCTTCATCAGTTCCATCGTGCGTAACCAG CAAACCTTGCACCGTGTACGCATGGGCCCTATCGGCTCGCCGAGCGAAGTGGCACAAGTGCAGAACAGCGTGCGTCTGGCCAATCTGGGGCAACCCAGCG TGGTCACCGCAGAATAAGCAGTAACGGATTGATGGCTCAGACGCGCATGCGCGCTTGAACCCTGGTTGTTGGCTCGTTGAACAATAAAAACCCAGGGGCA AGGGGTGAGCGGGCAACCGAACACGTGACAGTCTGGAAGCGGGCTGTCTGAATAGTTTTGCCCGCGAGGGCAAGTTTCCATAAGCAATTTCGAGAGACGG
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| DNA Sequence for Gene |
>MZ22_RS23115
ATGAACATCACCACCTTAGCCAAACGTACGTGCCTGCTTATCTCGCTGATCATCACCCCAGCCGCCTGGGCGGTTGAAATGGTGCCGGCCTCCCCGCAAC TGGCCGCCAAGTCGTGGGTCCTCATGGACGCCGCCAGTGGCAACGTGCTGGTCGAAAACGGCGGTGATGTACGCCTGCCGCCTGCCAGCCTGACCAAGCT GATGACTGCCTACATCGCGACCCTGGAAATCCGTCGCGGCCAGATCGGCGAAAACGACCCGGTTACCGTCAGCGAAAACGCCTGGCGTACCGGTGGTTCG CGGATGTTCATCAAGGTGGGTTCGCAAGTCACCGTGAGCGACCTGCTGCACGGCATCATCATCCAGTCCGGTAACGACGCCAGCGTCGCCCTGGCCGAGC ACATCGCCGGCAGCGAAGACGCCTTCGCCGACATGATGAACAAAACCGCCGGTGAGCTGGGCATGACCAACAGCCACTTCATGAACCCGACCGGCCTGCC GAACCCAGAGCACTATTCGTCGGCTCATGACATGGCGATCCTGGCGCGCGCCATCATCCGCGTTGACCCGGTGCACTATGCGATCTACTCCCAGAAGGAA TTCTTCTGGAACAACATCAAGCAGCCCAACCGCAACCTGTTGCTGTGGCGTGACAAGACCGTCGATGGCCTGAAGACCGGCCACACCGACGAAGCCGGCT ACTGCATGGTGTCGTCCGCCGTACGTGATGGCCAGCGCCTGATCGCCGTGGTATTCGGCACCAACAGCGAGCAGGCCCGTGCGGCCGAGACGCAAAAACT GCTGACTTACGGCTTCCGCTTCTTCGAAACCCAGACCTTCTACCAGAAGGGTGCTGAGCTGGCGACCGCGCCGGTGTGGAAGGGCGCGACGTCGCAAGTC AAGGCCGGCCTGGCCGACGACCTGACCCTGACCATGCCTAAAGGCCAGCTGAAAAAGCTCGCCGCCAGCATGACCCTGAACCCGCAATTGGTTGCGCCAA TCGCCAAGGGTGATGTGATCGGCAAGGTCGAAGTCAAGCTGGACGACAAGGTGGTGCACAGCGCCGACCTGATCGCGCTGGACGCTGTCGAGGAAGGTGG TATCTTCCGCCGCGTATGGGATAGCATCCGTCTATTCTTCTACGGCTTGTTCAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTGTGTGCACCTGCAAAGCCCCGCGTTGATCCAACGCGGGGCTTTGCCCGTCGCCACGGCTTAGCGCTTACGAGGCTGTTCTGCCATGACCGATAAAGAC GTAGAAGTAAAGGCGCCAAAGATCGAATTTCCTGTGACGGATTATCCCGTCAAGGTGATCAGCGATACCGGTGTCGGCCGCAAGGACAAGATTCTCGAGA TCGTCAGGAAGCACGCGACGATCAACGACAACCGCGTGGACGAGCGCCAAAGTTCCACCGGCAAGTACACCACGATCCAGTTGCACATCGTTGCGACCGA TCAAGACCAGCTCTACAACATCAACAGCGAACTGCGAGCCACCGGCTTCGTGCATATGGTGCTGTGATGTCGCAAGTCCTGGGCTTTCGCGAGCTCGGCC GGATGGCATACGAGCCGGTCTGGCATGCCATGCAGCGCTTTACCAATGAGCGCGGCACTTCGGCCCCGGATGAAATCTGGCTGGTAGAACACCCGCCGGT
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| Amino Acid Sequence |
>D-alanyl-D-alanine carboxypeptidase
MNITTLAKRTCLLISLIITPAAWAVEMVPASPQLAAKSWVLMDAASGNVLVENGGDVRLPPASLTKLMTAYIATLEIRRGQIGENDPVTVSENAWRTGGS RMFIKVGSQVTVSDLLHGIIIQSGNDASVALAEHIAGSEDAFADMMNKTAGELGMTNSHFMNPTGLPNPEHYSSAHDMAILARAIIRVDPVHYAIYSQKE FFWNNIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGQRLIAVVFGTNSEQARAAETQKLLTYGFRFFETQTFYQKGAELATAPVWKGATSQV KAGLADDLTLTMPKGQLKKLAASMTLNPQLVAPIAKGDVIGKVEVKLDDKVVHSADLIALDAVEEGGIFRRVWDSIRLFFYGLFN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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