Pseudomonas fluorescens AU6026, MZ22_RS22395
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU6026 Scaffold_140, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGACGACAAGGCTGCCATCGAAGCCAAGGTTGAGGAACTGTCGAAAGTCTCCGCGCCAGTTGCTCAGAAAATGTACGCCGAGCAAGGCCAGCCGGCTGAC GGCGCTGCGCAACAAGCAGAGCCTGAAGCCAAGCACGACGATGTTGTCGATGCCGAGTTCGAAGAAGTTAAAGACAACAAGTAAGTTGTCGCCCGGTTGA CCGCGCACAAGCGGTGACTGGTAGGATGTCGCCGCGCGGGAGCTTGCTCCCGCGTTGGCGTGTCTGGGGTATGCGAATTTTTACAGCATGCGACAACGCT CGGATGCTGGCGGTGTGAACGGGAATGCTCCTGCTTTCCGAATGACAGTCACCGCGTTTTTGGCCGGCTCCCTGGCTAAAAGCAGTAATGACCAGGATCG TTGAATTGACGTGAGTTGGGTCCGGGCCTGTATTGGGGCTCAACGAGTTTGGCAGGGTTCAGGAGGGCCAGGTCGAACGTCCTTAAGAGTGCAAAGACTT
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| DNA Sequence for Gene |
>MZ22_RS22395
ATGGCAAAGCGTGACTATTACGAAGTATTGGGTGTGGAGCGTGGCGCCAGCGAGGCGGACCTGAAGAAGGCCTACCGTCGCCTGGCGATGAAGCACCACC CGGACCGTAATCCGGATAACAAAGAATCCGAAGAGATGTTCAAAGAGGCCAACGAGGCCTACGAATGCCTGTGTGATCCCAATAAGCGTGCGGCTTACGA CCAATATGGCCATGCTGGCGTCGACCCGAGCATGGGCGGCGGCGGTGCCGGTTTTGGTGGCCAGAACTTCTCCGATATTTTCGGCGACGTATTCAGCGAC TTCTTCGGCGGCGGCCGGGGCGGCCAGCGTGGCGGCCCTCAGCGCGGCAGTGACTTGCGTTACACCCTGGAGCTGAACCTGGAAGAAGCCGTGCGCGGCA CCAGCGTCAATATCCGTGTGCCGACGCTGGTCAACTGCAAGCCGTGCGACGGCTCGGGTGCGAAGAAAGGCTCCTCGCCGATCACTTGCCCGACCTGTGG CGGTATCGGGCAGGTGCGCATGCAGCAGGGCTTCTTCTCGGTGCAGCAAACCTGCCCGCGTTGCCATGGCCAGGGCAAGATCATTTCCGATCCGTGCGAT TCCTGCCACGGCGAAGGCCGCGTCGAAGAGTACAAGACGCTGTCGGTGAAGGTACCGGCGGGTGTGGATACCGGTGATCGTATTCGCCTGTCGGGCGAAG GCGAGGCGGGTGCCCAGGGCGGCCCTACGGGCGACCTGTACGTGGTGATCAATGTGCGCGAGCACTCGATCTTCCAGCGTGACGGCAAGCACTTGTTCTG CGAAGTGCCGATCAGCTTTGTTGATGCGGTCCTGGGTGGCGAGCTGGAGATTCCGACGCTGGATGGTCGGGTCAAGCTCAAGATTCCCGAGGGGACTCAG ACCGGCAAGCAGTTCCGCATTCGTGGCAAGGGCGTTGCGCCCGTGCGCGGTGGCGGTGCTGGCGACCTGATGTGCCGTGTGGCGGTTGAAACCCCGGTGA ACCTGAATCGTCGTCAGCGTGAACTGCTGGAAGAGTTCCGCAGCTCGCTGGAAGGCGATGACTCGCACTCGCCGAAGACTACGGGCTTCTTCGACGGTGT AAAACGCTTCTTCGGCGACCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGATCTGAATATGCGACGTATAGCCGTAATGGGCGCTGCCGGGCGCATGGGCAAGACGCTGGTCGAGGCGGTGCAGCAACGCTCGCCGGCCTCCGGGCTG ACGGCGGCGATTGTTCGCCCAGGCAGTACGTTGATCGGCGCGGACGCAGGTGAGTTGGCCTCGTTGGGTCGCATCGGTGTTTCGTTGTCTGGCAACCTCG AGCAGGTGGCGGACGAATTCGACGTGCTGATCGACTTCACCTTGCCGGAAGTGATGCTGAAAAATCTGGCCTTCTGCCGTAAGGCGGGCAAGGCCATGGT GATTGGTACCACCGGTTTGAGTGCCGAGCAGAAACAGTTGCTAGTGGAGGCGGGCAAGGATATTCCGATCGTCTTCGCCGCCAACTTCAGTGTGGGCGTG AACCTGTCGCTGAAGTTGTTGGACCTGGCGGCGCGCGTGCTAGGTGACGAGGCTGATATCGAGATTATCGAGACTCATCACCGTCACAAGATCGACGCTC
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| Amino Acid Sequence |
>molecular chaperone DnaJ
MAKRDYYEVLGVERGASEADLKKAYRRLAMKHHPDRNPDNKESEEMFKEANEAYECLCDPNKRAAYDQYGHAGVDPSMGGGGAGFGGQNFSDIFGDVFSD FFGGGRGGQRGGPQRGSDLRYTLELNLEEAVRGTSVNIRVPTLVNCKPCDGSGAKKGSSPITCPTCGGIGQVRMQQGFFSVQQTCPRCHGQGKIISDPCD SCHGEGRVEEYKTLSVKVPAGVDTGDRIRLSGEGEAGAQGGPTGDLYVVINVREHSIFQRDGKHLFCEVPISFVDAVLGGELEIPTLDGRVKLKIPEGTQ TGKQFRIRGKGVAPVRGGGAGDLMCRVAVETPVNLNRRQRELLEEFRSSLEGDDSHSPKTTGFFDGVKRFFGDL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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