Pseudomonas aeruginosa PA7, PSPA7_4349
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGGGACCTGCGCACCCGCGAACAAACCCTGCAATGGCTGTTCTGGCAGATGGGCGGGCTGGGGCCGATGGCCGGACAGAACCATCACTTCAGCCGCTTCG CCGCGCAGAAGATCCCCTACGCCATCGAGCGCTACGTCAAGGAAACCGCGCGCCTGTATGGCGTCCTCGACCAGCGTCTGGCCGACCGCGCCTTCGTCGC CGGCGACGACTACAGCATCGCCGACATGGCGATCTATCCGTGGATCGTCCCGCACCAGTGGCAGGAGCAGGATCTTGCCGACTTCCCCCACCTGCAGCGC TGGTTCGAGAACATTCGCCAGCGCCCGGCGACGCAACGCGCCTATGCTTTGGTGGAGCGCATCAACCCGCCGAAGTAGCGAGTCCCGAGCCGGCCTGCGA ATGTCCTCGCGGACGACCGCAGGCGGAGCTTGCGCGGCCCTGCGCTCCTCTCTAACGTAGCGCCTCTCGACGCGACCACCCCCGCAGGAGCTCCCACCCC
|
|
| DNA Sequence for Gene |
>PSPA7_4349
ATGGCCTCGCCAGCCTTCATGCGCTTTCTTCCCCGTTGCGGCGCCGCCGCGGCCTTCGGCACCCTGCTCGGTCTCGCCGGCTGCCAGTCCTGGCTCGACG ACCGCTATGCCGACAGCCTGCCGCCAACCTCCGGCGTGCAGCCGATCAAGGGCCTGGCGCAGAACGTCTCGATCCGGCGCAACGCGCTGGGCATGCCGCT GATCGAGACCAGTACCTTCCACGACGCGTTGTTCGCCCTGGGTTACGTGCACGCTTCCGACCGCCTCAGCCAGATGGTCGGCCTGCGCCTGCTGGGCCAG GGGCGTCTGGCCGAGATGGCCGGCCCCGGCGCGCTGGAGATCGACCGCTTCATGCGCACGGTGAACCTGCGCCAGGCCGCGGAGATCCAGTACAAGAACG CCTCGCCACGCCTGCGACGCTTCTTCGAGGTCTACGCGCGCGGCGTCAACGCCTACCTGTACCGCTACCGCGACAAGCTGCCGATGGACCTCGCCCAGTC CGGCTACCGCCCGGAATACTGGAAGCCCGAGGACTCGGCGCTGGTCTTCGTCCTGCTCAACTTCGGCCTGGCGGTGAACCTCCAGGAAGAAATCGCCTCG CTGGCGATCGCCCAGAAGGTCGGCAGCGACAAGCTGGCCTGGCTGACCCCGTCCTATCCCGACGAGAACCTGCCGTTCGACGAAGCGGAAAAGCTCAAGG GTCTGCGCCTGGACGGGCAGATTCCCGGTCTCGCCGGCATCGATGGCGCCGCCCGGCAGGTCGCCGCATTGAGCATGCTCGGCGTCGCCGCCTCGAATAA CTGGGCCATCGCGCCGCAACGCAGCCGCAGCGGCAAGAGCCTGCTGGCCAACGACACCCACCTGCCGCTGAGCATGCCTTCGGTGTGGAACTACGTGCAG ATCCGCTCGCCCAAGTACCAGGCCGCGGGCGTCTCCATCGCCGGCCTGCCGGGCGTGGTGGCGGGCTTCAACGGCAAGCTGGCGTGGGGCATGACCATGG TCCTGGGTGACAACCAGGATCTCTACCTGGAACAGCTGCGACGCCAGGGCAACCGCCTCTACTACCTGGCCGACGGCAAATGGCTGCCGACCCGCGAGCG CCAGGAAACCTTCTTCATCAAGGGCCAGCGGCCAATCCGCGAGGTGATCCACGAAACCCGCCACGGCCCGCTGCTCAACAGCGCCCTGGGTGAACGCAAG AACATCCTCCAGCCGCTGCCGCTGAGCAGCGGCTATGGCCTGGCCTACCGCAGCATCCAGCAGGAAGCCGACCGGACCCTCGACGGTTTCTTCGACCTGT CGCGAGCCCGGACCATCGAGCAGGCCTTCGACGCTACCCGCGAAATCCGCGCGATGCCTCTGAACATCGTGTTCGCCGACGAGAAGCACATCGGCTGGCA GGTCACCGGTCGCTACCCGAACCGCAAGGAAGGTCGCGGCCTGCTGCCCTCCCCCGGCTGGGACGGGCGCTACGACTGGGACGGCTATGCCGAGCCGATC CTCCATCCCTCCGACCAGGACCCGCAGCAAGGCTGGCTGGGCACCGCCAACCATCGGACCGTGCAACCCGGCTACGGCGCCCAGCTGTCCAACTCCTGGT ACTATCCGGAGCGCGCCGAGCGCATCGCCCAGTTGGCCGGCGCCAGCAGGAGCCACGATACCCAGAGCATGATCCGCATGCAGTACGACCAGACCTCGCT GTTCGTCGCCAAGCTGCAGGCGATGTTCGACAGCCCCGGCATGGCCCTGCCGCTGCGCCAGGCCATCGACGCCCTGCCGGAAGCGCAGCGCGGTCGCGCG CACGAGGCCTACGACCGGCTGATGGCGTTCGACGGCAAGCTGGCGGCGAACTCCAGCGACGCCGCGCTGTACGGCGCGTTTCTCCAGGAAAGCGCCCGGC AGATTTTCCTCGACGAACTCGGTCCGGAGGATGGTCCGGCCTGGAAGGCCTTCGTCGAAACCGCCAACCTCTCCTACTCGGCGCAGGCCGACCACCTGCT CGGTCGCGACGACAGCCCGTTCTGGGACGACACCCGGACGCCGCAGATGGAAGACAAGCCGGCGATCCTGGCCCGCAGCCTGGCCGCTGCGGTGGCGTTC TGCGAACAGCGGCTGGGCAGCGAGCGCAAGGCCTGGCAATGGGGTTCGCTGCACACCTATGAATGGCAGAGCGACAGTTCGCGGATGGCTCCCTATCTGA GCGCCGGTGAGCGTGCCGGACTCGGCGCAATCAAGGGCTATCTCGACCGCGGTCCCTACCCGGCGGGGGGCGACCATACCACCCTGGACGTGTCTGCCTA TAACTGGGGCCAGGATTTCGACACCTGGCTGATCCCGGCGATGCGCCTGATCGTCGATTTCGGCCAGAGCGAACCGATGATCGGCGTGAACAGCAGCGGC CAGTCCGGCAACCCGGCCAGCCCGCACTATGCCGACGGCATCGATGCCTGGCTCAAGGGGCGTTACGTCAGCTTCCCGTTCCAGCCACAGAACCTCGACC GCGCCTATGGCAGCAAGCGGCTGACCCTCACGCCCGCGCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGGGGACAGGCATGGAACTTTCCACCACGCCACCGCTCTGAACAGTCGACTTACTCCATGATCATCTTCGGGCGTCCTCCCGGGCGCCCTTCTTTTCCTC TCCCTCGCGACATCCTTTCCTCCATCAACCTTTTCCGAAGAGACTCACGATGCCTATCGAGTTGAAGCATTGCTTCGTCTTCACGGGCGCCCCCGGCACG GGCAAGACCAGCCTGCTCGAAGCCCTGCGGCGGCACGGCCAACGCTGCGTGGGCGAGGCTGGCCGGGCGATCATCCGCCAGCAACTGGCGAACCGGGGCG ACGCCCTGCCCTGGGCGAACGCCGAAGCGTTCAAGACACTCATGCTGGAACAGGCCCTGGCGACGTGGCAGGCACATCGCGAAACCGCCGGCCCGGTATT CTTCGACCGCGGTATCGTCGACGTCCTGGGTTACGCCCGCCTGAGCCGACTCGACGAACCGCCCGCGCTGCGCGAAGCGGCGAACGACCTGCGCTACAAC
|
|
| Amino Acid Sequence |
>putative penicillin amidase
MASPAFMRFLPRCGAAAAFGTLLGLAGCQSWLDDRYADSLPPTSGVQPIKGLAQNVSIRRNALGMPLIETSTFHDALFALGYVHASDRLSQMVGLRLLGQ GRLAEMAGPGALEIDRFMRTVNLRQAAEIQYKNASPRLRRFFEVYARGVNAYLYRYRDKLPMDLAQSGYRPEYWKPEDSALVFVLLNFGLAVNLQEEIAS LAIAQKVGSDKLAWLTPSYPDENLPFDEAEKLKGLRLDGQIPGLAGIDGAARQVAALSMLGVAASNNWAIAPQRSRSGKSLLANDTHLPLSMPSVWNYVQ IRSPKYQAAGVSIAGLPGVVAGFNGKLAWGMTMVLGDNQDLYLEQLRRQGNRLYYLADGKWLPTRERQETFFIKGQRPIREVIHETRHGPLLNSALGERK NILQPLPLSSGYGLAYRSIQQEADRTLDGFFDLSRARTIEQAFDATREIRAMPLNIVFADEKHIGWQVTGRYPNRKEGRGLLPSPGWDGRYDWDGYAEPI LHPSDQDPQQGWLGTANHRTVQPGYGAQLSNSWYYPERAERIAQLAGASRSHDTQSMIRMQYDQTSLFVAKLQAMFDSPGMALPLRQAIDALPEAQRGRA HEAYDRLMAFDGKLAANSSDAALYGAFLQESARQIFLDELGPEDGPAWKAFVETANLSYSAQADHLLGRDDSPFWDDTRTPQMEDKPAILARSLAAAVAF CEQRLGSERKAWQWGSLHTYEWQSDSSRMAPYLSAGERAGLGAIKGYLDRGPYPAGGDHTTLDVSAYNWGQDFDTWLIPAMRLIVDFGQSEPMIGVNSSG QSGNPASPHYADGIDAWLKGRYVSFPFQPQNLDRAYGSKRLTLTPAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|