Pseudomonas fluorescens AU6026, MZ22_RS06565
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU6026 Contig_74, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CACCGTCGGCATGCACGCCAAGACGTCGAGCTACATCATGACCGGCGCGCTGTTCCTGTACATGTGCATGCAGCCGTTGTTCGGCATGTTGGCCGACAAG ATCGGCCGGCGTAATTCGATGCTCTGGTTTGCCGGCCTTGGCACGCTGTTTACCGTGCCGATCCTGCTGACCTTGAAAACCGTGACCAGCCCGTTTTTGG CATTTGTGCTGATCACCCTGGCCTTGGCGATTGTCAGCTTCTACACCTCCATCAGCGGCCTGGTCAAAGCGGAGATGTTTCCGCCGCAGGTGCGTGCCTT GGGCGTGGGCCTGGCCTATGCGGTGGCTAACGCGGTGTTTGGCGGTTCGGCAGAAGTGGTTGCGCTGAGCCTCAAATCCATCGGCATGGAAAACACATTT TATTGGTACGTCACCGCGATGATGGCGGTGGCCTTCCTGTTCAGCTTGCGCCTGCCGAAACAGGCGGCGTACCTGCATCACGATCTGTAAGGGATGAGTT
|
|
| DNA Sequence for Gene |
>MZ22_RS06565
ATGACGTTGCGCACGAGCAATCAACTGTTCGACGCTTATTTGACCGCTGACAGCATGGCCGAGGTGTTCTGTGACCAGGGGCGCTTGCAGGGCATGCTGG ATTTCGAGGCGGCGCTGGCTCGGGCGCAGGCCCGGGTTGGGTTGATTCCCCAGTCCGCCGTCGCACCGATTGCCCAGGCGTGCCTGGCGTCGCTGTATGA CGTGGACGCCCTTGGCAGCGCGATTGCCACGGCGGGCAACTCTGCGATTCCATTGGTGAAGGCGTTGGGCAAGTTGATCGCCAGTGAGGATGCCGACGCC GAGCGTTATGTCCACCTGGGCGCAACCAGTCAGGATGTGATGGACACCGGCTTGGTGCTGCAACTGCGCCGTGGGGTGGAATTGATCGAGGCCGACCTGG CTCGCCTGGGGGAGGTGTTGGCCGCCCAGGCCCAGCGTTACGCCAGCGTGCCGTTGGCCGGACGCACCTGGTTGCAGCACGCGACGCCGGTCACCCTGGG GATGAAAATCGCCGGTTGGCTGGGCGCGGTGACGCGCAGTCGCCAGCGCCTGGCCGAGTTGAAGCCGCGCCTGCTGGTGCTGCAATTTGGCGGCGCCTCG GGCACCTTGGCCGCGCTCGGCGAACACGCCATGCCTGTGGCCGAGGCCTTGGCCGCCGAGTTGCAACTGGGCTTGCCGGAGCAACCCTGGCACACCCAGC GTGACCGCCTGGTGGAGTTTGCCAGCCTGCTCGGTCTGATCGCCGGTAGCCTCGGCAAGTTGGGCCGCGATATCAGCCTGTTGATGCAGACCGAAGCGGC GGAGGTGTTCGAGCCTTCGGCGCCGGGCAAGGGCGGTTCGTCCACCATGCCGCACAAGCGTAACCCGGTGGGCGCCGCGGTGCTGATCAGCGCAGCCACC CGCGTACCCGGCCTGGTGGCGACAATGTTCAGCGCCATGCCCCAGGAGCACGAACGCAGCCTGGGCTTGTGGCACGCCGAATGGGAAACCTTGCCAGAGA TTTGCCGCTTGGTGTCCGGTGCCTTGCATCAGGCAATTCTGGTCAGTGAAGGGCTGGAGGTGAATGCCGAACGCATGGCACAGAACCTCGACCTGACCCA AGGCCTGGTACTGGCCGAAGCGGTGAGTATCGTGCTCGCCCAACGCTTGGGCCGTGACACCGCGCACCATCTGCTGGAACAGTGCTGCAAACGTGCGGTC GCCGAGCAGCGCCATTTGCGCGCGGTACTGGCGGATGAGCCGCACGTCACCGCCGAGCTGTCGGCGGCTGAACTGGATCGCCTGCTCGACCCTGCCCACT ACCTGGGCCAGGCGTCTACCTGGGTCACGCGTGCGGTGACCGAACATTTTGCTTTGACTGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGAGACCGCTGTGGCTTTTGTACAACTCGCCGAGGGCGAACTGCATTACCAACTCGAGGGGCCCGCCGACGCACCGGTATTGGTGCTGTCCAATTCCCTG GGTACCGACCTGCATATGTGGGACCTCCAGATACCGGCCTTCACCGAGCATTTTCGTGTGCTGCGATTCGACACCCGTGGCCACGGCCAATCCCTGGTGA CCGAGGGGCCTTACAGCATCGAGCAACTGGGCCGAGACGTGATCGCGCTGCTGGATGCGCTGGATATCCAGAAGGCGCATTTTTGCGGACTGTCCATGGG TGGCTTGATCGGCCAGTGGCTGGGTATTCATGCCGGCGAGCGCCTGCAACGCCTGGTGGTGTGTAATACCGCGGCCAAGATCGGCACGCCCGAGGTGTGG AACCCGCGTATCGAAATGGTCCTGCGTGATGGCGCAGCCGCGATGGTGGCGCTGCGCGATGCGTCGATTGCGCGCTGGTTCACCGCGGATTTCGCCGCTG
|
|
| Amino Acid Sequence |
>3-carboxy-cis,cis-muconate cycloisomerase
MTLRTSNQLFDAYLTADSMAEVFCDQGRLQGMLDFEAALARAQARVGLIPQSAVAPIAQACLASLYDVDALGSAIATAGNSAIPLVKALGKLIASEDADA ERYVHLGATSQDVMDTGLVLQLRRGVELIEADLARLGEVLAAQAQRYASVPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLAELKPRLLVLQFGGAS GTLAALGEHAMPVAEALAAELQLGLPEQPWHTQRDRLVEFASLLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAAT RVPGLVATMFSAMPQEHERSLGLWHAEWETLPEICRLVSGALHQAILVSEGLEVNAERMAQNLDLTQGLVLAEAVSIVLAQRLGRDTAHHLLEQCCKRAV AEQRHLRAVLADEPHVTAELSAAELDRLLDPAHYLGQASTWVTRAVTEHFALTA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|