Pseudomonas fluorescens AU6026, MZ22_RS26900
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU6026 Contig_58, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATCCCAGTTCACTGCCCAGCCGTAGTCGGCGGGATAGATGTCGCTGGTCAGGCGCTCCTCATAGCCGTGTAACTGGTCGGGGCCGCAGAAGTGCATCTT GCCCGACAGTGCGGTGCGGTAGCCCAGGCGGCGCAAGTAGTGGGCATAGGTCGGCACATCGGCGGGGAAATCGGCGGCGTTGTCGTAGGCGCCGATCTTG CTCGGCAACTGGCCGCTGACCAAGGTGAAGCGCGACGGTGCGCACAGCGGGCTGTTGCAATAGGCGGCGTCGAACACCACGCCTTGTGCCGCCAGGCGGC TGAGGTTGGGCAGCTTGATCGGGGAAGGCCCGTAGAACGGCAGCATCGGCGCGGCCATCTGATCGGCCATGATGAAAAGAATGTTCTTGCGCTTCATGGT TTCTCGGCATTCCATAGGCAGTGTTTATGCCAATGAGCATGCGGCCCATGAATTATGGGGTAAAGCCCATGAGCAGCAATGACTAGGATAAGTTGAGCTT
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| DNA Sequence for Gene |
>MZ22_RS26900
ATGTATGAAGCGCTGGGTGACCTCTCTCTCGATTTGCTGCGCGCCTTTGAGGCAGCGGCGCGTCATCGCAGTTTCACCGCGGCCGCGATGGAGCTGGGCA CCACCCAACCGGCGGTCAGCCAGCAAATCAAACGCCTTGAAGAGCAACTGGCGATCCGCCTGTTTGATCGCATTTACCGCGGCATCGAACTGACTGACGC CGGTGCCCTGCTGTTCGAGCATGTGCAAGGCGGCCTGCAGAACATCAACCAGGGGCTCGGCGCAATCACTCAACAAAGCCAGCATGAAGTGCTGCAAGTC GCCACCGACTTTGCCTTCGCCGCCTATTGGCTGATGCCACGCCTGCATCGTTTTCACCAGGCCAACCCGCAGGTGGATGTCAGCCTGGTCACCAGTGAGC GCAACCCGGCCACCCTGCGCAGCGATATTGATGTGGCGGTGCTGTTCGGCGATGGCCGTTTCAAGCAGGGCGAGAGCCTGTGGTTGTTCAATGAGGAAGT GTTCCCGGTGTGCAGCCCACAGTGGCTCAAGGAGCAGGTCGCGCCCCTGACGGTGCAGACCTTGCAAGACTGCCCGTTGCTGCACCTGCGCCAGGAAAAC AACAGCCAGTGGTTTGACTGGAACGGCGTGTTCCGCGAACTGGGTATCACGGCTGCGCCGACCCCGGGGCAATTGCGCTTCGACAACTACACCTTGCTGA TCCAGGCCGCGATTGCCGGCCAGGGCGTCGCCATCGGCTGGCGCCACCTGGTGGATAACCTGCTGGAGCAGAATTGGCTGTGCCGGCCGATCAGCTCCAC GGTGATCTCGCGCTTGGGCTATTACGTGGTGCAACCCCAGCGCAAACGCCGCGGACAGTTGGTGGACCGCTTTGTCGAGTGGCTTGTGGCGGAACAGGCC AACAGTGCGCACTCGTTGACCGGGCTGGCCCTGCCGTCGATTGCGGTCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GATCGGCCCACAGTGGAACCGGAGTCAGTCATGCAACGTATCAAGGGCTACCACGCCCATATCTACTTCGACGCCAGCACGATTGAGCAGGCGCGCACGC TCTGTGAGGACGCCGCCAAGTTGTTCCCGCTGCGCATGGGCCGTGTGCACGAGCGGCCCGTGGGCCCGCACCCGGATTGGAGTTGCCAGCTGGCGTTCGA GCCGGAATATATCGGTGTGGTGTTGCCGTGGCTGGCGCTGCATCGCAATGGTCTGGTGGTGTTCCTGCACCCTGAAACCGGTGACGACCTCAAGGACCAC ACCGATTACGCCATCTGGATGGGCGCGATGCGCGAGCTGGACTTGTCGATTTTTTAACCTTCCTTACCCGATAAATCCGCGGCCTTCCCTAAGTAAAAAC AAGAATGGTTGTAGGATTTATCTTGTCTTGTCTCATTATATGGGATTGATATTTATATATTGAGATATTCCGCTCCCTAGGTTTATATTCGCCCATCTGC
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MYEALGDLSLDLLRAFEAAARHRSFTAAAMELGTTQPAVSQQIKRLEEQLAIRLFDRIYRGIELTDAGALLFEHVQGGLQNINQGLGAITQQSQHEVLQV ATDFAFAAYWLMPRLHRFHQANPQVDVSLVTSERNPATLRSDIDVAVLFGDGRFKQGESLWLFNEEVFPVCSPQWLKEQVAPLTVQTLQDCPLLHLRQEN NSQWFDWNGVFRELGITAAPTPGQLRFDNYTLLIQAAIAGQGVAIGWRHLVDNLLEQNWLCRPISSTVISRLGYYVVQPQRKRRGQLVDRFVEWLVAEQA NSAHSLTGLALPSIAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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