Pseudomonas fluorescens AU6026, MZ22_RS26815
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU6026 Contig_58, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTTCGGCTTCGGGCGTGATCGCCGGGACGTCGCTGCGATCCTTGAAGTGATTGACCTTGGGTTTGCCGCCGACAAACGACCACAGCAACCCCACCGGGT CTTCCAGCGCCAGCCAGGCCGCGGCGTTGCGCCGGGTGGCATTGAGCTTCAAGCGATTGCGCACGATGCCGGGATCCTGCATCAGCGCCTCGATTTCTTC GTCGCTCAACTGGGCCAGGCGCTGCGCATCAAACCCGAACAAGACCTTTCGATAATGCTCGCGTTTGCGTAAAACGGTGATCCAGGACAGGCCTGCCTGG AACCCTTCGAGCAAAAGCAACTCGAACAAACCCTGCGCATCGCGCAGCGGCGTTCCCCACTCTTGATCGTGATAAGCCATGTACAGCGGATCTTCAGAAC ACCAAAAGCAGCGTGGCATAAGGCTCCAGGGAGTGGTGGCGGGGCCGAATCGGGTATACTCCCGCTCTTTAAATCGCAGCCCAAGTAACAGGTGAATTTC
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| DNA Sequence for Gene |
>MZ22_RS26815
GTGAGCCAGCCTACGCCAGCCGTGCGTACCTTCCAAGACTTGATCCTCGCCCTCCAGCAATACTGGGCCGAGCAAGGTTGTGTGGTACTTCAGCCCTACG ATATGGAAGTAGGCGCCGGCACTTTCCACACCGCTACATTCCTGCGGGCCATCGGCCCGGAAACCTGGAACGCCGCTTATGTGCAGCCCAGTCGTCGCCC GACTGACGGCCGCTACGGCGAAAACCCGAACCGTCTGCAGCACTACTACCAGTTCCAGGTGGTATTGAAGCCCAACCCGGACAACTTCCAGGAGCTGTAC CTGGGCTCGCTCAAGCATGTGGGCCTGGACCCACTGGTGCACGACATTCGTTTCGTCGAAGACAACTGGGAATCGCCAACCCTGGGCGCCTGGGGCCTGG GCTGGGAAGTCTGGCTCAACGGCATGGAAGTGACGCAGTTCACTTACTTCCAGCAAGCCGGCGGCATCGAGTGCTACCCGGTCACTGGCGAGATCACCTA TGGCCTTGAGCGCCTGGCCATGTACCTGCAAGGCGTGGACTCGGTCTACGACCTGGTATGGGCTGACGGCCCGTTCGGCAAGGTGACCTACGGCGATGTG TTCCATCAGAACGAGGTGGAGCAGTCCACCTACAACTTCGAACACGCCAACGTCGACAAGCTGTTCGAACTGTTCGACTTCTATGAAAGCGAAGCCAAGC GCCTGATCGAACTCGACCAGCCGCTGCCGTTGCCAAGCTATGAAATGGTGTTGAAGGCGTCCCATACCTTCAACCTGCTGGATGCCCGCCGTGCTATTTC GGTTACTGCGCGCCAGCAATACATCCTGCGTGTGCGCACCCTGGCGCGTTCCGTCGCCCAAGCCTACCTGCTGGCTCGCGCCAAGCTGGGCTTCCCGATG GCAACCCCGGATTTGCGTGATGAAGTGTTGGCTAAGCTGGAGGCTGCACAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGCTCAAGATTTCCTGGTTGAACTGGGCACCGAAGAGCTGCCACCCAAGGCACTCAATACCCTGGCCGATGCGTTCCTGGCCGGTATCGAAAAAGGCCT GCAGACTGCCGGCCTGAAGTTTGAAGCCAAAAAAGTCTACGCCGCGCCGCGCCGTCTGGCTGTGCTGCTGACCGCGCTGGAAACCCAGCAGCCGGACCGC AACATCAACCTGGACGGCCCACCGCGTCAGGCAGCTTTCGATGCCGACGGCAACCCGACCCAGGCCGCCCTTGGCTTTGCCAAGAAGTGTGGCGTAGAGC TGAGCGAGATCGACCAAAGTGGCCCGAAACTGCGTTTCAGCCAGGTCATCACCGGCAAGCCGACCGCCAGCCTGTTGCCGACCATCGTTGAAGACTCCCT GAACGACCTGCCTATCCCCAAGCGCATGCGCTGGGGTGCGCGCAAGGAAGAGTTCGTGCGTCCGACCCAATGGCTGGTGATGCTGCTCGGTGACCAGGTC
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| Amino Acid Sequence |
>glycyl-tRNA synthetase
MSQPTPAVRTFQDLILALQQYWAEQGCVVLQPYDMEVGAGTFHTATFLRAIGPETWNAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVLKPNPDNFQELY LGSLKHVGLDPLVHDIRFVEDNWESPTLGAWGLGWEVWLNGMEVTQFTYFQQAGGIECYPVTGEITYGLERLAMYLQGVDSVYDLVWADGPFGKVTYGDV FHQNEVEQSTYNFEHANVDKLFELFDFYESEAKRLIELDQPLPLPSYEMVLKASHTFNLLDARRAISVTARQQYILRVRTLARSVAQAYLLARAKLGFPM ATPDLRDEVLAKLEAAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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