Strain | Pseudomonas fluorescens strain AU6026 Contig_58, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTCGATCTGCCGCACGATGCTGCGTTCTTCATCGCCCAACGCATCCGTTCCAACGTGCGTGAGCTGGAAGGCGCGCTCAAGCGGGTCATCGCTCACTCGC ACTTCATGGGCCGCGATATCACCATCGAGCTGATTCGCGAGTCCTTGAAAGACTTGTTGGCCTTGCAGGACAAGCTGGTGAGTGTGGATAACATCCAGCG CACCGTGGCCGAGTACTACAAGATCAAGATTTCCGACCTGCTGTCCAAGCGCCGTTCGCGCTCGGTCGCACGTCCACGCCAGGTTGCCATGGCCCTCTCC AAGGAGTTGACCAACCACAGCCTGCCGGAAATCGGTGATGTGTTCGGCGGACGCGACCACACCACGGTCTTGCACGCATGCCGCAAGATCAATGAACTTA AGGAATCCGACGCGGATATTCGCGAGGACTACAAGAACCTGCTGCGTACACTGACTACGTGATGACACCAGCGCAGCTTATTAAGGCAAGGGACTAGACC
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DNA Sequence for Gene |
>MZ22_RS26775
ATGCATTTCACCATTCAACGCGAAGCCCTGTTGAAACCCCTGCAACTGGTCGCAGGCGTCGTCGAGCGCCGACAGACCTTGCCGGTGCTTTCCAACGTAT TACTGGTGGTCGAGGGGCAGCAGTTGTCCTTGACCGGTACCGATCTGGAAGTCGAACTGGTGGGTCGCGTCCAGCTCGAAGAGCCCGCCGAACCGGGCGA GATCACCGTGCCGGCGCGCAAGCTGATGGATATCTGCAAAAGCCTGCCCAACGATGCGCTGATCGACATCAAGGTGGATGAGCAGAAGTTGGTGGTCAAG GCAGGCCGTAGCCGTTTCACCCTGTCGACCTTGCCGGCCAATGACTTTCCAACCGTAGAAGAAGGCCCGGGCTCGCTGACGTGCAGCCTGGAGCAAAGCA AGCTGCGTCGTTTGATCGAGCGCACCAGCTTCGCTATGGCTCAGCAGGACGTGCGTTACTACCTCAACGGTATGCTGCTGGAAGTATCGGAAGGCATCAT CCGCGCCGTGGCCACCGACGGTCACCGTCTGGCAATGTGCTCGATGCGTGCCGATATCGGTCAGCCGGATCGTCACCAGGTGATCGTTCCACGCAAAGGT ATCCTTGAACTGGCGCGTTTGCTCACCGAGCCGGACGGCAACGTCAGCATCGTGTTGGGCCAGCACCACATTCGTGCCACCACCGGCGAGTTCACCTTCA CCTCCAAGCTGGTCGACGGCAAGTTCCCAGACTACGAGCGTGTGTTGCCTAAAGGTGGCGACAAGCTGGTGGTCGGTGATCGTCAGGCCCTGCGTGAAGC CTTCAGCCGTACTGCGATTCTGTCCAACGAAAAGTACCGTGGTATTCGCCTGCAACTGGCCAACGGCCAACTGAAAATCCAGGCCAACAACCCGGAACAG GAAGAGGCGGAAGAAGAGGTGGGTGTCGACTACAACGGCGCATCGCTGGAAATCGGCTTTAACGTGAGCTACCTGTTGGACGTGCTGGGTGTCATGACCA CCGAACAGGTTCGTCTGATCCTGTCGGACTCCAACAGCAGCGCCCTGGTGCAAGAATCTGACAACGACGACTCGGCTTACGTTGTCATGCCGATGCGCCT GTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCATGCTCAGCAGAAGCTAGATGTCCCTTAGTCGCGTCTCGGTCACCGCGGTGCGCAATCTGCACCCGGTGACCTTCTCCCCTTCCCCCCGCATCAACAT CCTCCATGGCGCCAACGGCAGTGGTAAAACCAGCGTGCTGGAAGCCATCCACCTGCTGGGGCTTGCGCGTTCCTTCCGCAGTGCCCGTTTGTTACCCGTG ATTCAGTACGAACAATTGGCCTGTACCGTATTTGGCCAAGTGGAACTGGCTGAGGGCGGACATAGCAGCCTGGGGATATCGCGTGATCGCGGTGGCGAAT TTCAGATCCGAATCGACGGGCAAAATGCGCGCAGCGCAGCGCAACTCGCCGAGATCCTGCCGTTGCAACTGATCAACCCCGACAGCTTTCGATTGTTGGA GGGGGCCCCAAAAATCCGTCGGCAGTTTCTCGACTGGGGCGTGTTCCACGTGGAACCACGCTTCATGGCCACTTGGCAGCGCCTGCAGAAGGCCCTGCGG
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Amino Acid Sequence |
>DNA polymerase III subunit beta
MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLEEPAEPGEITVPARKLMDICKSLPNDALIDIKVDEQKLVVK AGRSRFTLSTLPANDFPTVEEGPGSLTCSLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSEGIIRAVATDGHRLAMCSMRADIGQPDRHQVIVPRKG ILELARLLTEPDGNVSIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLPKGGDKLVVGDRQALREAFSRTAILSNEKYRGIRLQLANGQLKIQANNPEQ EEAEEEVGVDYNGASLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALVQESDNDDSAYVVMPMRL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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