Pseudomonas fluorescens AU6308, MZ32_RS15550
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU6308 Scaffold_250, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCGATGGTGTCGCTGGATGTGACCAAAGACCGAGGCATGTTCCGTGAAAACAGCCAGGGCTTGATCGAAAACATCTACAGCCTCAAGGTGATCAACAA GACCCAGCAGCGCCAGGACTACCGCCTGGAACTGGTGGATGCCGAGGGGTTCCAGCTGCAAGGCAAGACCCAGGTCAGTCTGGCTGCCGGGGAAATTGTC GATATACCGGTGTCGGTAGCGTTGCTGGCGGACACACCGGCCAGCAGCTCTCAAACCCTGCGTTTTAAAGTCACTGATGTGGATGAGCCTTGGATTTATA CCGCTGCTGACAGCCGCTTCGTTGCGCCCTTGAATCGCTGAACAACGATAGAGATCAACTGTAGGAGCGAGCTTGCTCGCGAAAAACTCACCGTCGCCGC GTTCATTCAGGAAACACACGTTATCGTTGACGTTTTTCGCGAGCAAGCTCGCTCCTACAGTTCGCCCTGCATACACATTCAAAAAGCTAATCAGGCCGCC
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| DNA Sequence for Gene |
>MZ32_RS15550
ATGAAACGCTACGAAAAATTTGCCGACGACATCGCAGAACTGATCCGCTCCGGCGTCCTCGGCCCCGGCCAGCGCGTACCATCGGTACGCTATGCCAGCC AGGCCTACGGCGTCAGCCCGTCCACGGTATTCCAGGCCTATTACTTGCTGGAGCGTCGTGGCCTGATCAGGGCGCGCCCGCGTTCTGGCTACTTCGTCAA CACCCACGCGCCGAGCCCGTTTTCCGAGCCGGTGGTGAGTGAGCAGGTGCATGAGTCCACCGATGTGGGCGTTAGTGAGCTGGTGTTCTCGGTACTGGAC TCGATCAAAGACCCCAACACCGTGCCCTTCGGCTCGGCCTTCCCCAGCCCCATGCTGTTCCCGCTGCCGCGCCTGGCGCGCTCCCTGGGCAGTGCCAGCC GCGACATGGACCCACGCCTGGTGGTCACCGACATGTCGCCAGGCAACCCGCAACTGCGCCGCCAGATTGCCCTGCGCTATATGGTCGGCGGCCTGATGCT GCCGATGGAGGAGTTGCTGATCACCAACGGCGCCCTCGAAGCACTCAACCTGTGCCTGCAGGCCGTGACCGAACCGGGCGACCTGGTGGCCATCGAAGCG CCGGCGTTCTACGCCTGTTTGCAAGTGCTTGAACGCCTGAAGCTCAAGGCTGTGGAGATCCCGGTGCACCCGCGCGACGGTATTGACCTGAACGCCCTGG CCCAAAGCCTTGAGCGCTATCCGATCAAGGCCTGCTGGACCATGACCAGCTTCCAGAACCCCATGGGCGCCACGTTGCCTGAAGAGAAAAAACAGGCGCT GGTGGAACTGCTGCGCAGCCATCAAGTGCCGCTGATCGAAGATGACGTCTACGCCGAATTGTATTACGGGCAACAGGCCCCGAAACCGGCCAAGGCCTTC GACACCGAAGGGCTGGTGATGCACTGTGGCTCCTTTGCCAAGAGCCTGGCACCGGGTTACCGCGTGGGCTGGGTCGCCGCCGGGCGCTTCGCACAGAAGG TCGAGCGGCTGAAACTGATGACCTCACTGTGCCCGTCAATGCCGGCCCAGGCGGCGATTGCCGACTACCTGCAACACGGCGGCTATGACCGGCACCTGCG CAAACTGCGCTACGCCCTGGAAGAACAGCAGAGCGCCATGCTGGCGGCCATCGCTCGTTATTTTCCGGCGCAAACACGGGTCAGCCAGCCGGCGGGAGGC TATTTTCTGTGGTTGGAACTGCCGGAGCAGACCGACTCGCTGAAATTGTTCCAGATGGCTCTGGCCCAGGGCATCAGCATTGCGCCGGGGCCGATCTTTT CCGCCACTCAGCGGTTCAGAAACTGCATTCGCCTGAATTACGGAAGCCCTTGGAACGAGGCGTCGGAAAAGGCCATGGAGACATTAGGGCGGATCGTGCG CTCGTTTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGGCCGCCGCCCAAGTCGATAAACGTTCCGGTGGAATACGATGCCTTGTCCGACAGTAACCAGATAATCGCCTCCGCTACTTCATCCGGGCGCCCGCCAC GCGCCATCGGGATACCTGATTCCAGCTTGCTGACCCGGTCCGGGTCGCCGCTCAGGGCATGGAAATCGGTAAAGATATAGCCAGGGCGCACGGCGTTGAC GCGAATGCCCTCGCCCGCCACCTCCTTGGACAACCCCAGGGTAAAGGTATCCAGCGCCCCCTTGGAGGCAGCGTAGTCGACATACTCACCTGGCGAGCCC AGCCGCGCCGCCACCGACGACACGTTGACGATACTGCCTCCCTGCCCTCCATGCCGGGGCGACATGCGCAATACCGCGTGTTTGGCACACAGGATCGGGC CCAGCACATTGGTCTTGAGGATTTTGAGGATACGAAACTCGGACATCTCATCGACCCGCGACTTATGCCCCACGGTGCCGGCGTTATTCACCAGCGCGGT
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| Amino Acid Sequence |
>GntR family transcriptional regulator
MKRYEKFADDIAELIRSGVLGPGQRVPSVRYASQAYGVSPSTVFQAYYLLERRGLIRARPRSGYFVNTHAPSPFSEPVVSEQVHESTDVGVSELVFSVLD SIKDPNTVPFGSAFPSPMLFPLPRLARSLGSASRDMDPRLVVTDMSPGNPQLRRQIALRYMVGGLMLPMEELLITNGALEALNLCLQAVTEPGDLVAIEA PAFYACLQVLERLKLKAVEIPVHPRDGIDLNALAQSLERYPIKACWTMTSFQNPMGATLPEEKKQALVELLRSHQVPLIEDDVYAELYYGQQAPKPAKAF DTEGLVMHCGSFAKSLAPGYRVGWVAAGRFAQKVERLKLMTSLCPSMPAQAAIADYLQHGGYDRHLRKLRYALEEQQSAMLAAIARYFPAQTRVSQPAGG YFLWLELPEQTDSLKLFQMALAQGISIAPGPIFSATQRFRNCIRLNYGSPWNEASEKAMETLGRIVRSF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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