Pseudomonas fluorescens AU6308, MZ32_RS03250

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU6308 Scaffold_230, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGTCTTGTTGTTCTTGCGCCAGGACAATGCCAATGCCGAGCAATCGGCGCAGGTGGTCATCCCGGCGATTCGCCTGCTCAGCGTCGGCGACCAACTGGGT TTGGCCAACGACGGCACCCCGGCAGTACCGCCACCCGCCACCGCCGAAGAACGCGCCCAGGCGGCTCAACGTCGCACCGCCGCGCGCAGTGTGGTGCTGG CGGTGCCCGAACAATTGCTGAGTCGGCTGATGCTCGCTTCCCAAGCCGGCACGCTGCGCCTGGCCGTGCGCAGTGCCGACGAACAATTGCTCAGCCGCTA CTGGGCCGGTGAAAGCGACACCCCGGACAAGGTGCAAAGCGCCAACCGCGACCTCTACCAATTCACCCAATTGGCCCTCAGCGGCCCGCCGAAAAAAATC ACCCCCGCGGTGGCCGTCACCGGCCAGCGTCGGGGTATCGAAGTGATTCGCGGCGCGGCGGCAGCACAACCTACCCCCTGATTGAACAAGGATGCCTTGA
DNA Sequence for Gene
>MZ32_RS03250
ATGAGCCAACGCTACGCTCAATTGGCCTTGGCCTTGATGCTGCCGTGCCTGCCCCTGGGCATGGCGATGGGCGCATCGGGCAGCTGCAACGCCCTGGGCC AATTGCCCGCCGTGATCGAGGTAGGCGAAGGCTTGCAGACCGAGCTGCAGTCGCCGGTAGCGATTACGCGCCTGGCTATCGGCGACCCGAAAATTGCCGA TGTGCGGGTCAACGGCGACCGCCATTTCCTGCTCACTGGCGTCGGCAGCGGCGCTACCAGCCTGATGGTGTGGACCGGCTGCTCGACCACGCCGCGCCAG AGCATGGTGTTCGTCAAGGGCAAGGCTACTTCGGCGCTGACCAGCCAATCGCTGTCGCCCTCCGAAGACCCGACGCTGCCCAGCCAGGTGCAGACCGATA TTCGTTTTGTCGAGGTCAGCCGCACCAAGCTCAAGGAAGCCAGCACCAAGATCCTGGGCATGGGTAAAAACTTCTTCCTCGGCAGCCCCGACTTGCTGTC CCCGTCAGAGGGCATCTTCAAATTGCCGGTGAGTGCCGACAACTTCAACATCGGGTTTGGCGGTGGCCGGGTCAAGGCACTGATCAACGCCCTGGAAAGC AGCGGTTTCGCCTATACCCTGGCGCGCCCGAGCCTGGTGGCCATGAGCGGCCAGAGCGCGACCTTCCTGGCCGGCGGCGAAGTGCCGATTCCGGTGCCCA GTGCCGGCAGCGATACCATCACCATCGAATACAAGGAGTTCGGTATTCGCCTGACCCTCACGCCCACGGTCATCGACCACAACCGCATCGCCCTGAAAGT CGCCCCGGAAGTCAGCGAGCTGGATTACAGCAACGCGATCCGAATCCAGAATATCCAGGTGCCGGCCCTGACCGTCCGGCGCACCGACACCAGTGTGTCA CTGGCCGACGGTGAAAGCTTTGTGATCAGCGGCCTGATCAGCAGCACCAACCGCTCCACCATCGCCAAGCTCCCGGGCCTGGGCGATATCCCGATCCTTG GTGCGTTTTTCCGCGACTCCAATATCCAGAGCGAAGAGAAAGAACTGCTGATGATTGTCACGCCGCATCTGGTCCAGCCACTGGCTGCCAATGCGCAGTT GCCGTCGCTGCCCGGCGAAAAACTGCGCACCTATGATCCGAACTGGTTCCGCCTGTTCTTCCTGGAAAACGGCAACTTCGACCGTCGCAGTGGACTTTCC CAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGATAGCCTGAGCCAGACCTTCCTGGCAATCACCCGTAACAGCACCGACCTGGAATGGCTCCAGGGTGCCCTGGCCCCTCTTGGCCAAGTGATCAACGT GGGCGGCGGCAGCCTGGATGAATTGCTGGCACTGGTGGACGTGACCTTCGCCAACCTGGTGTTCGTGGGCCTGGATCGCGAGCACCTGGTAGCCCAGAGC GCCTTGATCGAAGGCGCCCTGGAAGCCAAGCCGATGTTGGCGGTGGTGGCCTTGGGCGACGGCATGGACAACCAGTTGGTACTCAACGCCATGCGTGCCG GTGCGCGGGATTTTGTCGCCTATGGTTCACGCTCCAGCGAAGTGGCCGGGCTGGTGCGGCGCCTGAGCAAGCGCTTGCCGCCCAGCGCGCCGAACGCCCA TCTTGGCGGCCTCACCGTGCTCTACGGTGCCCAGGGCAATACCGATGGCGCCCTGCTGGCGAGCCACCTGGCGATGGTGGTGCAAAAGAGCGGCCAGCAG
Amino Acid Sequence
>secretin
MSQRYAQLALALMLPCLPLGMAMGASGSCNALGQLPAVIEVGEGLQTELQSPVAITRLAIGDPKIADVRVNGDRHFLLTGVGSGATSLMVWTGCSTTPRQ SMVFVKGKATSALTSQSLSPSEDPTLPSQVQTDIRFVEVSRTKLKEASTKILGMGKNFFLGSPDLLSPSEGIFKLPVSADNFNIGFGGGRVKALINALES SGFAYTLARPSLVAMSGQSATFLAGGEVPIPVPSAGSDTITIEYKEFGIRLTLTPTVIDHNRIALKVAPEVSELDYSNAIRIQNIQVPALTVRRTDTSVS LADGESFVISGLISSTNRSTIAKLPGLGDIPILGAFFRDSNIQSEEKELLMIVTPHLVQPLAANAQLPSLPGEKLRTYDPNWFRLFFLENGNFDRRSGLS Q
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site