Strain | Pseudomonas fluorescens strain AU6308 Scaffold_210, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGTTCCTGGTCGACAAATCACGGTGTAGCGTCGCCATCGAGTACCAAGGCCAACGTCATGCCGTCGAGCTGCCCGCCTCCGCGTCTCTGCTCACGCCGGC TGTGCCCATCGAGCCGGCCAAGCCGGAGGGCCGTGCCGATGCCAGTGTGCCGCTGGTGAAACTCGCCGTGGCGCGCTCTGGTGACAAGGGCAACCATAGC AATATTGGCGTGATAGCCCGCCACCCCGACTACCTGCCGTGGATCGCCGAAGCCCTGACCCCGGAGGTGATCGTCGACTGGATGGACCACGTGCTCGACC CGATCCATGGCCGCGTCGAACGCTGGTACTTGCCCGGCAGCCACAGCCTGAATTTCCTGCTGGAGAATGCCCTGGGCGGCGGCGGTATCGCCAGCCTGCG CATCGACCCGCAAGGCAAAGCCTTCGCTCAGCAACTGCTGGAAATCCCCATCGCCGTGCCGCAACACATTGCCGATCAACTCACCTAAAGGACCGTCGCC
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DNA Sequence for Gene |
>MZ32_RS10155
GTGGCCTTCGACTCGATCTTCAAAGCCGACCTGTTCAAGGGGCAAACCGTGATTGTCACCGGAGGCGGCAGTGGCATTGGCCGCTGCACCGCCCATGAGC TGGCGGCCCTTGGTGCCTGCGTGATCCTGGTGGGGCGCAAGCCAGAAAAACTGCAGAAGGTCGCGGCGGAAATTGCTGAAGATGGCGGCGTCGCCCATTG GCATGCCTGTGACATTCGTGAGGAAGAGGCGGTGAAAGCGCTGGTCACGCAGATCCTGCACGACCACGGCCCCATCCATGGCCTGGTGAATAACGCGGGC GGCCAATACCCGTCGCCACTGGCGGCGATCAATCAGAAGGGCTTTGAAACCGTACTGCGCACCAACCTGGTGGGCGGTTTCCTGATGGCGCGGGAAGTGT TCAACCAGTCGATGAGCAAGCACGGTGGCGCGATCGTCAACATGCTCGCCGACATGTGGGGCGGCATGCCCGGCATGGGCCACTCCGGCGCGGCGCGCTC CGGCATGGACAACGTCACCAAGACCGCCGCGTTTGAGTGGGGCTATGCCGGGGTGCGCGTCAACGCCGTGGCGCCTGGCTGGATTGCCTCCAGCGGCATG GACACCTACGAAGGCGCGTTCAAGGCGGTGATTCCCACCCTGCGTGAGCATGTACCGCTCAAGCGCATCGGCACCGAGTCGGAAGTCAGCGCGGCCATCG TCTTCCTGCTCAGCCCGGCTGCGGCCTTTATCAGCGGTAGCACCCTGCGCATCGACGGCGCCGCCAGCCTGGGCAGCCGCGCATGGCCGCTGCACAAGGC GCAGGCGCCGAGCGAGCCATTCAACGGGTTCCACCGCGCCTACCTGCCGGATGTGCTCAAGGCGGAGCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCCATGCCAGTCATTGAAACCATGATCGAGCCTAACAGCCCAGCGTTCGCGCAAAACCGCGAAGCCATGCTGGCGTCCATTGCCCAGCTACGCCAACTG GAACACACCCTGCTGGCCAAGGCCCAGGAAGCCAAGCCCAAGTTCGACAAGCGCGGCCAATTGCTGCCCCGTGAGCGCCTCAACCTGCTGCTGGACCCCG GCGCGCCTTTCCTGGAGCTGGCCAGTCTGGCCGGCTACAAACTCCACGACGACAAGGACGGTAGCGCCGCCGGTGGCGGGCTGATCGCTGGTATCGGCTA TGTCAGCGGCGTGCGCATGCTGGTGGTGGCCAACAACAGCGCGATCAAAGGCGGCACCATTTCCCCCTCCGGGCTGAAAAAATCCCTGCGCCTGCAACAG ATCGCCATGGAGAACAAACTGCCAGTGGTGACCCTCGCCGAAAGCGGCGGCGCCAACCTCAACTACGCAGCCGAGATTTTCGTCGAAGGCGCGCGCAGCT
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Amino Acid Sequence |
>2,4-dienoyl-CoA reductase
MAFDSIFKADLFKGQTVIVTGGGSGIGRCTAHELAALGACVILVGRKPEKLQKVAAEIAEDGGVAHWHACDIREEEAVKALVTQILHDHGPIHGLVNNAG GQYPSPLAAINQKGFETVLRTNLVGGFLMAREVFNQSMSKHGGAIVNMLADMWGGMPGMGHSGAARSGMDNVTKTAAFEWGYAGVRVNAVAPGWIASSGM DTYEGAFKAVIPTLREHVPLKRIGTESEVSAAIVFLLSPAAAFISGSTLRIDGAASLGSRAWPLHKAQAPSEPFNGFHRAYLPDVLKAEQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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