Pseudomonas aeruginosa PA7, PSPA7_4146 (aprD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GGTACCCTGGAGCTGGGCAGCTACAACGAAGTCAAGCTGCTGAGCTGGAACGAGGTGACCCTCAAGGACCTGCCCATCGTCGGCGGCATCCTCGGCTATG TGCCGGTGGTCAAGGACATCGGCATCTCGCTGCCGACGCTGGACCTGCACTTCGACAGCAAGTTGTATGCGCAAACGATTGCCGGCGCCGACCTGGCCGG GGTCGGGCCGAAGGGGCAGATCGAGCTGGTGCACGACCTCGACAACGACCTGTCGATCGTCGCCGGCATCGCCGGGGACACTGCGCACAGCGCCCTGGAC GGCGCCGGCAGGGTGTTCGCGGCGCTGCTCGGCCAGGCTGTCGAGCCGGCGGCCCCGGCGATTCAGCTGATCGGCGCCGACCCGGCGCCGGAGCACCAGG CCCTGGCTGCCTGACGGCGAGGGAACGCCCGGCACAGGGAGGTGCCATCCGGGCTCATTCGGGATTCCAGCGGCAGTCGTGGCAGAAGTGAGCGCGCTCG
DNA Sequence for Gene
>PSPA7_4146 |aprD
ATGGCAAGGCTCGGTTCCAGCGTTACCAACGAAATCAAACAGGCCCTCGCCGCCAGCCGCGGCGCGGTGCGCAGCGTGGCGGCATTCTCCGGGGTGATCA ACCTGCTGATGCTGGTGCCGTCTCTGTATATGTTGCAGGTGTACGACCGCGTGCTGTCGTCGGCCAACGAAGTCACCCTGTTGATGCTGACCCTGATGGC GCTCGGCGTGTTCGTCTTCATGGGCGTGCTGGAGGCGCTGCGTAGCTTCGTCCTGGTGCGGGTCAGCGAGCGTTTCGACGGCCAGTTGCACGGTCGGGTC TACGCCGCCGCCTTCGAACGCAACCTGCGCGGTGGCGGCCAGGAGGCCAGCCAGGCGCTGCACGACCTGACCACCCTGCGCCAGTTCATCACCGGGCAGG CGCTGTTCGCCTTCTTCGACGCGCCCTGGTTCCCGGTCTACCTGCTGGTGATCTTCCTCTTCGACCCATGGCTCGGCCTGCTCTCGCTGGTCGGCGCGCT GGCGCTGATGGCCCTGGCCTGGTTCAACGAGCGCGCCACCCGCGCGCCGCTGGCCAGGGCCGGCGAGCTGTCGATCAAGTCCGGGCAGGTGGCCAGCAAT ACCCTGCGCAACGCCGAGGTGATCGAGGCGATGGGCATGCTCGGCAGCCTGCGCGGGCGCTGGGAGCAATTGCACCAGGCGTTCCTCGACCAGCAGAGCC TGGCCAGCGAGCGCGCGGCGCGGATCAACGCGCTGAGCAAGTACCTGCGCATCGCCCTGCAATCGCTGGTGCTCGGCCTCGGCGCCTGGCTGGCGGTGGA GGGGCGGATCACCCCGGGGATGATGATCGCCGGCTCGATCCTGATGGGCCGTGCGCTGGGGCCGATCGACCAGTTGATCGGCGTGTGGAAGCAATGGGGT TCGGCGCGCGACGCCTACCGTCGGCTGGACGGCCTGCTCGGCGAGTTTCCCGCCCGCGAGGCACGCATGGAGCTGCCCGAACCGCGCGGCCAGTTGCTGC TGGAGTCGGTGGACGCGGCGCCGCCCGGCAGCGAAGCGCGCACCCTGCGCGGGCTGACCCTGGCGATTCCGGCCGGCGCGGTGGTCGGCGTGATCGGCCC GTCCGGCTCCGGCAAGTCGAGCCTGGCGCGGGTCCTGCTGGGCATCTGGCCGACCCTGCAGGGCAGCGTGCGCCTGGACGGCGCCGAGATCCGCCAGTAC CGGCGCGAGACCCTCGGTCCGCGCATCGGCTACCTGCCGCAGGATATCGAGCTGTTCGCCGGCACGGTGGCGGAGAACATAGCCCGCTTCGGCGCGGCGG ACCCGGAGAAGGTGGTCGAGGCGGCGCGCCTGGCTGGCGTCCACGAGCTGGTACTGCGCCTGCCGCAAGGCTACGACACCGCGCTCGGCGTCGGCGGTGC CGGGCTGTCCGGTGGCCAGCGCCAGCGCATCGCCCTGGCCCGCGCGCTGTACGGCGCGCCGAACCTGGTGGTGCTCGACGAACCCAACTCGAACCTCGAC GACAGCGGCGAACAGGCTCTGCTGGCGGCGATCCAGGCGCTCAAGGCGCGCGGCTGCACGGTGCTGCTGATCACCCACCGGGCCGGCGTGCTGAGCTGCG CCGACCGCCTGCTGGCGCTGAACGCCGGGCAGTTGCACCTGTACGGCGAGCGCGACCAGGTGCTCGGTGCCTTGAACAGCCAGCGCGCCGCGCCGGCGCC GCAGCAGCGCGCGGACTACCGGGTGGGCGGCTATGGCACGCCGCAGGTGGTGGCCGCGCCGCGCCAGGGAGGAGTGGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCGTATGGCGAAACGCGACGAGAACGCCTATGCGCGCATGGGCTGGCTGCTGGTGCTGTTCGGCTTCGGCGGCGCGCTGCTGTGGGCGGCCTTCGCGCC GCTCGACCAGGGCGTGGCGGTGCCGGCCACGGTGATCATTTCCGGCCAGCGCAAGTCGGTACAGCACCCGGTCGGCGGGGTGGTCAAGCACATCCTGGTG CGCGACGGCCAGCGCGTCGAGGCGGGCGAGCCGCTGATCCGCCTGGAGCCGACCCAGGCCCAGGCCAACGTCGACTCGCTGGTCAACCAGTACGTCAACG CCCGGCTCAACCAGGCGCGCCTGCAGGCCGAATACGACGGCCTGCATACCCTGGAGATGCCCACGGGGCTGGCCGGTCAGGCGCCGGTGGCGAGCCTCGG CGAGCGCCTGGAGCTGCAACGGCAGTTGTTGCGCAGCCGCCAGACCGCGCTGGGTAACGAACTCTCCGCGCTGCGCGCGAACATCGAGGGCCTGCGCGCG
Amino Acid Sequence
>alkaline protease secretion protein AprD
MARLGSSVTNEIKQALAASRGAVRSVAAFSGVINLLMLVPSLYMLQVYDRVLSSANEVTLLMLTLMALGVFVFMGVLEALRSFVLVRVSERFDGQLHGRV YAAAFERNLRGGGQEASQALHDLTTLRQFITGQALFAFFDAPWFPVYLLVIFLFDPWLGLLSLVGALALMALAWFNERATRAPLARAGELSIKSGQVASN TLRNAEVIEAMGMLGSLRGRWEQLHQAFLDQQSLASERAARINALSKYLRIALQSLVLGLGAWLAVEGRITPGMMIAGSILMGRALGPIDQLIGVWKQWG SARDAYRRLDGLLGEFPAREARMELPEPRGQLLLESVDAAPPGSEARTLRGLTLAIPAGAVVGVIGPSGSGKSSLARVLLGIWPTLQGSVRLDGAEIRQY RRETLGPRIGYLPQDIELFAGTVAENIARFGAADPEKVVEAARLAGVHELVLRLPQGYDTALGVGGAGLSGGQRQRIALARALYGAPNLVVLDEPNSNLD DSGEQALLAAIQALKARGCTVLLITHRAGVLSCADRLLALNAGQLHLYGERDQVLGALNSQRAAPAPQQRADYRVGGYGTPQVVAAPRQGGVE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site