Strain | Pseudomonas fluorescens strain AU6308 Scaffold_210, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCATGATTGTTTGCTGCGCCGAGGACATGTAATGGCTACCGAACACGAAAACACTTCCGCCGAAGACCAGGCCCTGGCTGACGAGTGGGCTGCGGCCCTG GAAGAAACCGGCGATGTTGGCCAGGACGACATCGACGCGCTGCTGGCCGCCGACGCCGCCACCGCGCCGGCCGGCAACCGCCTGGCCATGGAAGAATTCG GCAGCGTGCCGAAGAACAACGACCCGGTGAGCCTCGATGGCCCGAACCTGGATGTGATCCTCGACATCCCGGTGTCGATTTCCATGGAAGTGGGCAGCAC CGAAATCAACATCCGCAACCTGTTGCAGCTCAACCAGGGCTCGGTGATCGAACTGGACCGCCTGGCCGGCGAGCCATTGGACGTGCTGGTCAACGGCACC CTGATTGCCCATGGCGAGGTGGTGGTGGTCAACGAGAAGTTCGGCATCCGCCTGACCGACGTGATCAGCCCGAGTGAACGCATCAAGAAGTTGCGCTGAG
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DNA Sequence for Gene |
>MZ32_RS09990
ATGAAGTACTCGATGGCGGGACTGTTGCTGGCGCTGCCATTGAGCGCCTTGGCGGCCGAGCCGGTGGCGCAGGTGGCTGCGGCGCCAGCGGTCGGCAGCG TCGGCGGGCAGTTGACGCAACTGGTGCTGGGCCTGTTGCTGGTGATCGGCCTGATCTTCCTGCTGGCCTGGTTGATGCGCCGCGTGCAGCGCATCGGCCC GGGCAACGGCCAGGTGATAGAGCTGGTGGGCTCGCGCGCCCTCGGCCCGCGTGATCGGCTGGTGCTGGTGCAAGTGGGCGAAGAGCAGATCCTGCTCGGC ATCACCCCCGGCCGCATCACCCCGCTGCATGTACTCAAGACCCCGGTGGACGCGGTCAAGACCGAAGCCGCCACGCCAGAATTCGCCCAGCGCCTGATGG AGTTGCTGGGCAAGGATCAGAAGGATAAGAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGCGCGTTTTGTTGACGCTCATGCTGTTGCTGGCCGCGCCGATGGCCCTGGGCGCCGACCCGTTGTCGATCCCGGCGATCACCCTGGGCACCAACGCGGC GGGCGCCCAGGAATATTCGGTCAGCCTGCAGATCCTGCTGATCATGACGGCGCTGAGTTTCATCCCAGCGTTCGTCATGCTGATGACCAGCTTTACGCGG ATCATCATCGTCTTCTCGATCCTGCGCCAGGCCCTGGGCCTGCAGCAGACGCCATCGAACCAGATCCTCACCGGCATGGCGCTGTTTTTGACGCTGTTCA TCATGGCGCCGGTGTTCGACAAGGTGAACCAGCAAGCCCTGCAACCTTATCTGGCGGAAAAGCTCACAGCCCAGGATGCCATCGACAAGGCTCAGGGCCC GATCAAGGACTTCATGCTGTCGCAAACCCGCTCCAGCGACCTTGAGCTGTTCATGCGACTGTCCAAGCGCACCGACATCGCCACTCCGGACCAGGCGCCG
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Amino Acid Sequence |
>flagellar assembly protein FliO
MKYSMAGLLLALPLSALAAEPVAQVAAAPAVGSVGGQLTQLVLGLLLVIGLIFLLAWLMRRVQRIGPGNGQVIELVGSRALGPRDRLVLVQVGEEQILLG ITPGRITPLHVLKTPVDAVKTEAATPEFAQRLMELLGKDQKDKK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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