Pseudomonas fluorescens AU6308, MZ32_RS08795
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU6308 Scaffold_210, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACTGGATACCCGCTTGCTTGAAGTAGTCGAGGTCCAGGTGGTCGGTGCCGATGGTGCAGGTGCCGACAAAGCGCACGTTACTGCCCTCAAGCAAGGCACG GTTGACGTTGGTCACCGAGCGCACCAGCAGTACATCGGCCTGCTCGACGGTGGCGCGGTCGATGGAGCGGCCGGGCACCCGGCGAATCTCGCCAAACCCT TCGAAGAATGCATCGATCAGCGGGATATTTTCGTCGGCAACAATCAGCATGGCAGGCTCCTTTGGCGGATTGGCAGTGTACAGAAGATCCTGTGTAGGAG CTGGCTTGCCTGTGATTGCATCGACCCGGTTTGCCTGATGTACCGAGGTGCCTGCATCGCAGGCAAGCCAGCTCCCACAGGGATCAGCGCTGGCCCGGGC GCATCGCTTACAAATCCCTAACACAGGTTTTTTCCTGACCGCTGCGTCAACGCGTAGAATCCGCCGTCCTTGCGACTGCCTTTTTATTGGACACCTGTAC
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| DNA Sequence for Gene |
>MZ32_RS08795
GTGAACACTGCCACCGCTACCCTCTCCCGCCCCGCCCGCATCAGCCGGGAAGTGCGCGGCCTGCTGACGCTGGCCTTGCCGATCATGATCGGCCAACTGG CCACCACCGCGATGAGCTTCGTCGACGCGGTGATGGCCGGGCGCGTGAGCCCGCAGGACCTGGCGGCGGTGGGCCTGGGTAATTCGATCTGGATCCCGGT GTACCTGTTGATGACCGGCACTCTGCTTGCCACCACGCCGAAAGTCGCCCAGCGCTACGGTGCGGGCCAGTTCAGCGAGATCGGGCCCTTGGTGCGTCAG TCATTGTGGCTGGCCGCCGTGGTTGGCATCGCAGGGGCGCTGTTGTTGCTATGCGCCGAGCCGATCCTGCATGCGATGAAGGTCGAACCCGACTTGATCG CGCCGTCCATGGGCTACCTGCACGGCATCGCCGCCGGTATGCCGGCGGTGGCGTTGTACTACGTGTTTCGCTGTTTCAGTGACGGCCTGGGCCGCACACG GCCGAGCATGGTCATGGGCTTGTGCGGCTTGGCGCTGAATATTCCGCTGAACTACATCTTCATCTACGGCCACTTGGGCGTACCGGCCATGGGCGGCGTG GGTTGTGGCTGGGCTACCGCGATTGCGATGTGGGTGATGATGATCGGCCTGGCCATCTGGACGCGCTGGGGCGCGGCCTATCAAAGCAGCGAATTGTTCA AGCGCTTCGACTGGCCGCAGTGGGCGGTGATCAAGCGCGTGTTGGGCATTGGCCTGCCGATAGGCGTGGCGATCTTTGCCGAATCGAGTATTTTTGCGGT GATCGCCTTGTTGATCGGCAGCCTGGGCGCCACGGTGGTCTCCGGTCACCAGATCGCGCTGAACGTCAGCTCCCTGGTGTTCATGATCCCCTATTCCCTG AGCATGGCCGTCACCGTGCGCGTCGGCCAGGCGCTGGGGCGCGGCGAACCTCGGCAAGCACGCTTCGCCGCCGGCGTCGGCATGGGCACCGCACTGGCGT ATGCCTGTTTTTCCTGCAGCTTGATGCTGTTGTTTCGCGAGCAGATTGCAGCGATCTACACCCCCGATCCGGTAGTGATCCACCTGGCGTCGATGCTGAT CGTGTTCTCGGCGCTGTTCCAGTTCTCTGACTCGATCCAGGTCACCGCCGCCGGCGCATTGCGCGGCTACCAGGACACCCGGGTGACCATGGTGCTGACC TTGTTCGCCTATTGGGGCGTGGGCCTGCCGGTGGGTTACGCCCTGGGCCTGACCAACTGGCTCGGCGAACCCAGCGGCCCGAGCGGTTTATGGCAAGGGC TGATCGTGGGCTTGAGCTGTGCGGCGGGGATGTTGGTGGTGCGCCTGGCGCGCAGTGCACGCCGACGCATTCGGGCCGAAAAGGCGCAGGCTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGGCTTTCTTGCGGATCCAGTACAGGTAGGTGCCAGCATCTTCCTGCTGATCCACCAGTTCATGGTCGAGAAACACGCAGAACTTGGGGATATCGCGAC GGGTCGACGGGTCGGTCGCGATCACCTTGAGCAGGCCGCCCGCCGGCAGGTCGCGGATGTGCTGGTGCAGCATCATCACGGGTTCCGGGCAGTTGAGGCC GGTGGCGTCGAGGGTGCCATCAACCGGCAGTTCAAGACTCATACTTCACTCCTAAAACTGGCACCGCTCAACAATGTGGGAGCGGGCTTGCCCGCGATGA CGGGGGCACATTCAACATAAATTTCGACTGTTATACCGCTTTCGCAGGCAAGCCAGTTCCCACATTTAATATCAGCGGCCTTTGGATTTCTTTACGTCTA CCAGGCGGCGCAGGTGACAGGTCACTTCTTCGCGATCATGGTAGAGCTGCTTGCAGCCGATCTCCACACGAATGCCACGCGCCTTGAAGCCATCTTCGAT
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| Amino Acid Sequence |
>multidrug transporter
MNTATATLSRPARISREVRGLLTLALPIMIGQLATTAMSFVDAVMAGRVSPQDLAAVGLGNSIWIPVYLLMTGTLLATTPKVAQRYGAGQFSEIGPLVRQ SLWLAAVVGIAGALLLLCAEPILHAMKVEPDLIAPSMGYLHGIAAGMPAVALYYVFRCFSDGLGRTRPSMVMGLCGLALNIPLNYIFIYGHLGVPAMGGV GCGWATAIAMWVMMIGLAIWTRWGAAYQSSELFKRFDWPQWAVIKRVLGIGLPIGVAIFAESSIFAVIALLIGSLGATVVSGHQIALNVSSLVFMIPYSL SMAVTVRVGQALGRGEPRQARFAAGVGMGTALAYACFSCSLMLLFREQIAAIYTPDPVVIHLASMLIVFSALFQFSDSIQVTAAGALRGYQDTRVTMVLT LFAYWGVGLPVGYALGLTNWLGEPSGPSGLWQGLIVGLSCAAGMLVVRLARSARRRIRAEKAQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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