Pseudomonas aeruginosa PA7, PSPA7_4091

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
CTGCAGAAACTCGAGGACGAGGACGACGGCAGCGTCTACTACACGCGCATCGCCTGCAAGCTGCTCGACCTGCAGACCTGCCGCTGCACCAACTACGCCG AGCGCATCCGCTTCGTCCCCGACTGCATCCAGCTCACCCCGGCCCAGGCCGACGAGTTCCAGTGGCTGCCACCGACCTGCGGCTATCGTCTGGTGGCCGA GGGCCGGGACCTGCCGCTCTGGCACCACCTGGTCTGCGGTGATCCGGAACAGGTGCACAAGGAGCGCATTTCCCAGTCCGGCCGCATGCTCAGCGAAAGC CAGGTGGCCGAGGACGACTGGGAGGACTACCTGATCTTCCGCGCCGGCTGAGCCATGTCCGTCCCTCCTCCTTACTTTTATGAAATGATATGTATTATCA TTCGCATATTTGCGAAGGGACTTCCGTATCCGACGGAAGCGGGGAGGCGAGGTGTTGCAGCGGGTCAACGGCGCGGGGGGCGCCGCCGGGGGAGGCACGG
DNA Sequence for Gene
>PSPA7_4091
ATGGATGAGCGTTTCCGTGGTTCCGTCTCGCATGCCTATCAGGCGTTCCATGGCGAGTTGCTGCGCTTCCTGCGCAGGCACCTGGGCAGCTCGGCGGACG CCGCCGACCTGGCCCAGGATACCTTCGCCCAGTGGTTGAAGTGGCCGGGCCGGCAGTCGGTCGAACAGCCGCGCGCCTTCCTGTTCCAGATCGCCCGCAA TCTCCTGCGCGATCACTGGCGCCGGCAGCAGAGCCGTGGCCAGGACCTCGAACGGCCGGCGGCTGACGACGAGCGTGCCGTGCCGGAGGCCGAGGTGGCC GGGCCGGGCGAGCGCTTCGAACACCAGCAGCGCCTCAGCCACCTCGCGGCGGCACTGGCCGACCTGCCGCCGCGACGCCGCGAGGCGTTCGTCCTGCACA AGTTCGATGGCCTGTCCCAGGCCGAAGTGGCCGCGCGCATGGGAATTTCCCTGAGCATGGTGGAAAAGCACATCGCCAGCGCCCTGCTGCACTGCAAGCG GCGCCTCGGCCAGGGAGGCGAAGGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACCGACGGAGCGGGTGGAGCCGCTGTTCGGCGAGGAAGCCGAACTGGACATCGACCAGCGCGCCGCGTACTGGTTCAGCCGCCGCCGTTCCGCGCATTT CAGCGCCGCCTGCCGGCTGGAGCTGGATGCCTGGCTGCGCGCCGATCCGCGCCATCGCGAAGCGCTCGACGGCATGGAGCGGCTCTGGCGCGAATTCGAC GGCCTGCCGCGCCCGGCGCTGGACGATATTCCCGAGCCGGTGCCGGCCTGGCGCCTGCCCCGGGCGCTGGCGGCGGCGTTCTTCGTGTTCTGCGCGCTGC TCGTCGCCACCCTGTTCTGGCGCGACCAGTCGCTCGGACCGAACCTCGCCTACGGCACGGCACCTGGCGAGCAGCGCGAGGTGGTCCTGGCGGACGGATC GAAGCTGTTCCTCGACGTCGATACCCAGGTCCAGGTGCGCTACGCCGAGCATACCCGCGACGTGCTGCTGAAGAGGGGCGAGGCGTTCTTCATGGTCAGC
Amino Acid Sequence
>ECF subfamily RNA polymerase sigma-70 factor
MDERFRGSVSHAYQAFHGELLRFLRRHLGSSADAADLAQDTFAQWLKWPGRQSVEQPRAFLFQIARNLLRDHWRRQQSRGQDLERPAADDERAVPEAEVA GPGERFEHQQRLSHLAAALADLPPRRREAFVLHKFDGLSQAEVAARMGISLSMVEKHIASALLHCKRRLGQGGEG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site