Pseudomonas fluorescens AU6308, MZ32_RS06670

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU6308 Scaffold_190, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCAAGCTGGCGATTTTCGACGTTGACGGCGTGCTGACCGATGGCCGCCTGTACTTCCTCGAAGACGGCAGCGAATTCAAGACCTTCAACACCCTCGACG GCCAAGGCATCAAGATGCTGATGGCAGCGGGCGTGCAAACCGCAATTATCAGCGGTCGAAAAACACCGGTTGTGGAACGCCGTGCACAAAACCTCGGTAT TCCTCACCTGTATCAGGGCCGCGAGGATAAACTGGTGGTGCTGGACGAGCTTCTTGGCCAACTCAACCTAAGCTATGAACAAGTCGCCTATCTGGGCGAC GACCTGCCAGACCTGCCGGTGATTCGCCGGGTGGGCCTGGGCATGGCCGTCGCAAATGCCGCGGCGTTTGTCCGCGAACACGCCCATGGCATAACCACCG CCCGTGGCGGCGAAGGTGCCGCCCGCGAGTTCTGCGAGTTGATCCTGCGTGCCCAGGGCAGTCTTGAAGCGGCCCACGCCGCCTACCTATAGAGCGTTAT
DNA Sequence for Gene
>MZ32_RS06670
ATGCTGAGTAAAAAGATTCGCAACTTCCTGTTATTCGGGGTCATCGCCGCGCTGCTCCTGGCGGTGGGCTACTGGAATATCAGCCCGGAGCGCTTTCTCG ACAAGCCTGTTGCACAGGTTGACGAAGGCCTTATCGACTATTACGCCACCAATGCCTACAGCATTCAGTATCTGCCCGACGGCAAGGTGCAGTATGAGAT GACATCGGACAAGGTCGAGCACTTGAAGGCTTCCGAAGTCAGCCTGCTGACCAATCCGGACCTGAACCTGTATCGCGGCACCGAATTTCCCTGGCACGTG ACCAGCAAGCGTGGCGAAGTCAACCCTGACGGCACCGAAGTTGAACTGATCGACTCGGTTCGCGTCGCACGTACAGACGCGCAGAACCGCGACACCATCA TTACCAGCAGTCGCATGACCGTATTCCCACAGAAGCAATATGCGCAGACCGAGCAAGACGTTAGAATCGACGGCGCTGGCGGTGTATCGACTGGCAAGGG AATGAAAGCGTATTTGAAAGAAAGCAGGATACACCTGCTATCGAACGTAAGAGGACAGTATGAGGCTCGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACTCTCCCTATTTTGCTCGGTCTGGGCGCAGCACTGGGAAGCGTGAGCGCCTGGGCTCTGCCGAACGATAGCCAGCAACCGATCCACATCTCGGCTGAC GATGCGCAGCTCGATGACAAGCAAGGTGTCGCCACCTACACCGGCGGCGTGATCATCACCCAAGGCTCGATGAAGATCACCGGCAACACGGTGACCCTGA CTCGTACCAAGACCGGCGATATCGATGTGGTGACTTCGGTCGGCAACCTGGCTTATTTCGAGCAGAAGCAGTCCGCTACCGATACAGGCCCCATGAAAGG CTACGGCAAGACTATCCAGTATCACGCCCAGCAGAACCGCATCGTACTGATTGACCAGGCCAAGGTGCTGAGCCCGGACGGCAACTCCACGGAAGGTGAA AAAATCACCTATGACACCGTGAAGCAGATCGCTAACGCCGGTCGCGCCAACGGCAACAAGGTCACCGCACCCCGCCCACGCATCGACATGGTTATCCAGC
Amino Acid Sequence
>lipopolysaccharide ABC transporter, permease protein LptC
MLSKKIRNFLLFGVIAALLLAVGYWNISPERFLDKPVAQVDEGLIDYYATNAYSIQYLPDGKVQYEMTSDKVEHLKASEVSLLTNPDLNLYRGTEFPWHV TSKRGEVNPDGTEVELIDSVRVARTDAQNRDTIITSSRMTVFPQKQYAQTEQDVRIDGAGGVSTGKGMKAYLKESRIHLLSNVRGQYEAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site