Strain | Pseudomonas fluorescens strain AU6308 Scaffold_190, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGTTGTTCCGCCGCAACGGCGACGACCAATACTCGGCATGATGCTGGTTGTCGGTTTGGGCTGCCAGCGTGGCTGTGAGGTTCACAGCCTGCTGGCGTTG CTGGACGGAGCCCTGGCCGCGGCAGGCATTGATCGCTCACGCATAACTGCGCTGGCAAGCATTGATCGCAAGCGCGATGAACCTGGGCTGCTGGCGCTGG CCCAGCGGTTGAACCTGCCCTTGCAGTGCTTCAGCGCCGAGCGACTGGCGGACTATGAGCATCGGCTAAGTCATCTCTCAACGCTGGCGTTTGCCCATAC CGGCTGTTATGGGGTGGCCGAAAGCGCCGCCCTGGCCCTGGCCGAGCACCTGTCCAACGGCCCCGCGCGCCTGCTGATCACCCGCCAGAAAAGCGCACAG GCCACCCTTGCATTGGCCTGCGCGGGCTAAAATCCCGATAATTGCCGCTTTTGAGCATGAGCCGTGTTCATGCTCACCCGTTTCTGAACAGGACTTCTCC
|
|
DNA Sequence for Gene |
>MZ32_RS04570
ATGACCGTCTACTTTATCGGCGCCGGCCCCGGCGACCCGGAATTGATCACCGTCAAAGGCCAGCGACTGATCCGCAGTTGCCCGGTGATCATCTACGCCG GCTCGCTGGTGCCCGCCGCCGTACTGGAAGGTCATCAGGCGTTCCAGGTGGTCAACAGTGCCGAGCTGCACCTGGAACAGATCATGGAGTTGATCAAGAC GGCCCATGCCAAAGGCCAGGATGTGGCGCGGGTGCACTCCGGCGATCCCAGCCTGTATGGGGCGATTGGCGAGCAGATCCGCCACTTGCGGGAAGTGGGT ATTCCTTTTCAGATCATTCCCGGGGTTACGGCAGTAGCGGCCTGCGCCGCGTTGCTGGAAACCGAGCTGACTCTGCCGGACATCGCCCAGAGCGTGATCC TGACCCGCTACGCCGACAAAACCAACATGCCGCCCGGTGAGAGCTTCGACAGCCTGGCCCGCCATGGTACGACCATGGCGATTCACTTGGGGGTCAATCA CCTGGAAAAGATCGTCGTCGAACTGCTGCCCCACTATGGCGCTGATTGCCCAATTGCCGTGGTGCACCGAGCGACCTGGCCGGATCAGGATTGGGTTGTC GGCACCCTGACAGATATTGCCGCCAAGGTCACAGCCAAGGGGTTCCGGCGCACGGCGCTGATTGTGGTGGGCCGGGTGCTGGCCAGCGACAGTTTCGGCG AGTCGTCGCTGTATCGGGCCGGGCATGCCCACCTTTACAGACCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TTATGTGGGGTGGCTTGCCCTAATCCCCGTAGGAGCGAGCTTGCTCGCGAAAACCCCATAGGCGCCGCGCTTATTCAGCAAGCATGCATTATCGTTGACG CTTTTCGCGAGCAAGCTCGCTCCTACAAAGAGCGCATAAAAAAACGGCGCTCACGGGGCGCCGTTTTTTATGCTCGCAGTGAACACCTTACTCAGTAGTA GGCGTTTTCTTTCTGCGTGTGGTCGGTCACATCACGTACACCCTTGAGCTCCGGGATGCGTTCGAGCAGGGTGCGCTCGATACCTGCGCGCAGGGTTACG TCCGCCTGGCCGCAGCCTTGGCAGCCGCCGCCGAACTTCAGTACGGCGATACCGTCATCCACCACGTCGATCAGGCTCACCTGGCCGCCATGACTGGCCA GCCCCGGGTTGATCTCGGTTTGCAGGTAATAGTTGATGCGCTCATTGACCGGGCTGTCGGCGTTGACGTTCGGCACCTTGGCGTTGGGGGCCTTGATGGT
|
|
Amino Acid Sequence |
>precorrin-4 C11-methyltransferase
MTVYFIGAGPGDPELITVKGQRLIRSCPVIIYAGSLVPAAVLEGHQAFQVVNSAELHLEQIMELIKTAHAKGQDVARVHSGDPSLYGAIGEQIRHLREVG IPFQIIPGVTAVAACAALLETELTLPDIAQSVILTRYADKTNMPPGESFDSLARHGTTMAIHLGVNHLEKIVVELLPHYGADCPIAVVHRATWPDQDWVV GTLTDIAAKVTAKGFRRTALIVVGRVLASDSFGESSLYRAGHAHLYRP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|