Pseudomonas aeruginosa PA7, PSPA7_3959
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGAGACGGTGGACAACAACGAGACCATCACCGTGCATGCCAACCGCAGCAAGACGGTGGACCGCAACGAAACGGTGAAGATCGGCATGAACAAGAGCGAG ACCATCCTCATGGCCTCGCTGCAGAACGTCGGCATGGGGCGCATGGAAAACGTCGGCCTCGGCTACAGCCTCAATGTCGGCATGATGATGAACACGGTGG TCGGGTTGAACCAGAGCACCCAGGTGATGAAGAAGAAGACCCTGTCGGTGGGCGACAGCTACGAAGTGAGCGTGGGCGGCAGCGACGACGGGTCGAAGAT CGGCCTGGACGGCAGGAGCATCGTCCTCGGCAGCCAGCGCATCGAGCTGACCGCCGACCGCGAGATCCTCCTGCGCTGCGGGCAGAGCACCATCCGCATC ACCCCGGCGGAGATCGAGATCCTCTCGCCGAACGTCGATATCAACTGTTGAGCGGCCGGCGAATGCCCGGTCGCAGGTTTTGCCAAGGAAGGATGGATAG
|
|
| DNA Sequence for Gene |
>PSPA7_3959
ATGAGCGGGCTACCCGTTTCCCATGTCGGTGAAAAAGTCTCGGGAGGCGTGATCTCCACCGGCTCTCCCACCGTGCACGTCGGCAGCAGCGCGGTCGGCC TGGCCGACCGGGTGTCGGCCTGCGTGCCGCTGGTGGGCAAACCGGTCAACCCGATGCTCGGGTGCAAGTTGTTGCCGGAGGAGGTCGATTTCGCCCTGGC GGCGCCGGACACCTTCACCTTCGCCCGCGGCTACCTGTCGAGCAATCCGCGGGTCGGGCGGCTCGGCCAGGGCTGGTGGCTGCCGGGCGAAAGCATGCAT CTGGAACTGGGTGACGAGGCTTGCGTGCTGGTCGATGCCCAGGGGCGGCGGATCGCTTTTCCCGCCCTGGCGCCGGGCGCGCAGTTCTATTCCGGCAGCG AGGAGCTCTGGCTGCGCCGCGGCGGCTCGAACCGCGAGGACGGCGAGGTGGAGGCCTGGCGCGGACGCTGGGCGGCGGTGCCGGCCGAACTCCGGGCGCA GGAAGCCTCGGTGCTGGTGCTCTCGGGCCACAGCTACCTGCACTTCCTTCGCCATCCCGACGGTATCTGGCGCCTGCAGGCCAGCTTCGGCCGCGCCGGC TACCGTACCGAGTACCGCTGGAGCGGACGCGGTCTGCTCACCGGCGTGCGCGACAGCGCCGGACGCAGCTATGCGCTGGTCTACCAGCAGGCCTGCGCGC CGAGCGAGGGCGACGACGGCCTGCGCCTGTTCGGCGTGATCCTGGCCAGCCACGACGGCCCGGCGCCGGACCATATCGACCCGCAGGATCCCGGGCTCGA CTGGCTGGTGCGCTACCAGTTCAACGACAGCGGCGACCTGATCGCCGTGCGCGATCGCCTTGGCCAGGTGGTGCGGGTGTTCGCCTGGCACGCGCACATG CTGGTCGCCCATGGTGAGCCGGGCGGGCTGGAGGTTCGCTACGAGTGGGATGTCCATGCCCCGCACGGGCGGGTGCTGAAACAGATCGAGGCGGGCGGCC TGACCCGCAGCTTCCGCTACCTGCGCGATGCCACCGAGGTCAGCGACAGCCTCGGCCGCGTCGAACGCTACGAGTTCGCCGGCGAAGGCGGGCAGCGGCG CTGGACGGCGCTGGTCAGGGCTGACGGCAGCCGCACCGAGTTCGACTACGACCTGTTCGGCCGCCTGGTCGCCCTGCGCGACCCGCTGGGCCGGGAGACC CGGCGCCGGCGCGATGGCCAGGGGCGGACGTTGGAAGAGGAGACGCCGGGCAAGGCGCGTTACCGCAAGACGCTCGACGAGGAGACCGGGCTGCTGGTCG AACTGGAGGACGCGATGCAGCGCCGCTGGCGCTTCGAGCGCGACGAGCGGGGCAACCCGGTCACCGTGCACGGCCCGGCCGGCAGCACCCGCTATCGCTA CGAGGACGCGCGCCTGCCCGACCGGCCGACGCGGATCGTCGATCCGCGTGGCGGTGAACGACGCCTGGAGTGGAACCGGCTCGGCCTGCTGGCGGCGCTG ACCGACTGTTCCGGCCAGACCTGGCGCTACGAATACGACAGTGAAGGACGCCTGACCTGCGAGACCGATCCGCTGGGCCAGGTCACCCGGCGCCGCTACG ATCCGCTGGGCCAGTTGATCGGCCTGGCCCTGGCCGATGGCAGCGCCCTCGGCTACGCCTACGACGCTCTCGGAAGGCAGACCCGGATCAGCGATGCCGA GGGCCGGGCCACGCTGTTTTCCTGGGGGCATGGCGATCTGCTGGCGCTGGTCTCCGATGCCAGCGGTCGCGAGTTGTCCTACCAGCACGACGAGGCTGGC AGGCTGCTCACCCTGACCAACGAGAACGGCGCCCAGGCGCATTTCCGCTACGACCCGCTCGACCGCCTGGTCGAGGAGACCGGCTTCGACGGGCGTCGCC AGCGCTACCGCTACAATGCCGCCGACGAGCTGGTTGCCCGCGAGGACGCCGACGGTCGGGAGACCGCCTATGCCTACGACCGCGACGGTCGCCTGGCGAG CGTCCGGATCCCGGCCAGCGATGCTGCGCCGGCGCTGGTCGAACGTTACCGCTGGCTGGCCGACGGCCGCCTGGCCAGTGCCGTCGGGCCGGATTGCGAA GTCCGCTACGAGTACGACGAGGTGGGCAACCTGCGCCTGGAAAGCCAGCTACATGCCGATGGCTGGGTCTACAGCGTCGAGCACAGCCACGACGAGCTGG GCATGCGTCAGACCAGCCGCTACGGCGACGCGCCGCCGGTGACCTGGCTGACCTACGGCGCCGGTCACCTGCACGGCGCGCTGGTCGGCGCCATCGAGCT GGCCTTCGAGCGTGACGCCCTGCAGCGCGAGGTGCGTCGCGACGCGCGCCATGGTGGGAAGAGCGATGCGCTGTTCGTCCAGGAGCGCCGCTACGGTGCG CTGGGGCGCCTGCAGGAGAGTCGCCTGCGCCTGGCCGGGGGCGCCGATTGGCAACGTGGCTATCGCTACGACGGACTCGGGCAACTGGTGGGCATCGACG ACAACCAGCAGCCGGCCGTGCGCTACGAATACGACCTTGCCGGCCGCCTGCTCGGCAGCCGGCGAGCCGGCCTGCCGGACCGCCGCTACCACTACGACGC CGCCGGCAACCGCCTGGACGACGAGGTGGCGAACCGGCGCGAAGCGGGTCGCCAGGCCTTCGAGCACAACGAACTGTACCGTTCCGGGTTCACTCGCTCC GCAAGCGGCGAGAGCGAGACCGGCGAGGCCCCGCAGCGCTGGCTCGGCAACCGGGTGCAGCGGATCGCCGGCAATCGCTACCACTTCGATGCCCAGGGCA ACCTGGTGGAGCGCGTCGGTGCCGACGGCGAGCGCCTGCGCCTGGCCTACGACGGCGCGCAGCGCCTGGTCCGGCTGACGCGCGAGGCTGCCGACGGCAC GCGGGTGGAGGCGCGCTATCGCTACGACGCACTGTCGCGGCGGATCGCCAAGAGCGTGCTGCGCGACGGCGTCGAGCAACAGGTGCGTTTCGGCTGGGAC GGCGACCGCCAGTGCGCCGAGGCCTTCGAGCGGCAGCTGCGCACGACGGTTCACGAACCGGGCGGTTTCGTCCCGCTGCTGCGCCTGGAGCAGGCCCGCG AACCCGATACCCCGGAACTGCTCGAGCTGCGCCGGACGTTCGCTGCCGAAGGCCAGCCGCTGCCGGCGCAATGCGTGCCGGAACTGGGCGAGGCGCGGTT CGCATTCTTCCATACCGATCATCTCGGGACCCCCCTGCAACTCAGCGACGAACGCGGGCAACTGCGCTGGCAGGGCGTCGCGCACGACTGGCGGGCGGTC GAGCCGGACCGCGAGCCCGGCGCGCAGCCGATCCGCTTCCAGGGCCAGTACCACGACGAGGAAAGCGGCCTCTACTACAACCGCTATCGCTATTACCTGC CCGAGGCCGGCCGCTACGCCAGCCAGGATCCGCTCGGCCTGGGCGGCGGGCCCAATCCCTATACCTATGCGCTGAACGCGCCGTCGGTGGCCTACGACCC CACCGGCCTGATCATCCCGCTGGTGGTGATCGGCGCCTTCGCCGCGCGGGCCGCGATCGGCGCGGCGCTGGGCGCCGGTATCGAGCTGGGCATGCAGACC GGCAAGCAAGTGCTGGGACAGATGAAGGACAACTGGGACAACGATCGCGATCTCACCGACATCAAGTGGAAGTGCATCGACATCAACTGGAAGCATGTCG GCGCCTCGGCGGCGATCGGCACCGTGGCGCCGGGCATGCTCAGCACCGGCAAGACGGTGGTCCAGTCGGCGAGGGCGATCAGGACCCTCTCGGGGCAGGC GGCGAACACCGCCAACCGCGCGGCCAAGCTGGCCGCGCGCAAGGCCGCGCATGCCGATACCATCAAGAAGGCGGTGGCCACCCAGGCCGCCTGGCAGACG GGCAAGCAGATCGTCAAGTGCCCGCTGAAGGACGAAGAAGAGGAGTGCCCACCGCAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCAAGCATTACCTGCTGATGACCCTCGTGTGCATTCCGCTGGCGTTGCTCTACGTCTGCCTGGAATGGTTCTTCGGCAACACCTGGGTGACCGTCGGGGT GTTCTTCGGCGTGCTCGTCGTGCTGCGCGTCGGCCTGTACCTGTATCGCCGTTCGAAGGGGATCAGGGATGGCTACCTGGACGAGTGAGGCAGACCCGAA TCGTGGAGCTGCGCCCCATGCAGAGCCTTTTCCTCAACGGCACCGTCGGCGTCGGCAAGTCCACCGTCGCCGAGGCCCTGGCCGGGCGCCTGGCCGGGCG CGGCGTGGCGCATGCGCTGCTCGACCTGGACGCGATCCGGCACTGCTGGCCGGCGCCGGCGGACGATCCCTTCAACCTCGCGCTGGAGCTGCGCAACCTT GCCGTGCTGGCCGCCAACTATCGCGCGGCCGGAGCGCAACGCCTGATCCTGGCGGGGGTGCTCGAGCGTCGCGCCGACCTCGCGCGCTACCGCGACGCGC
|
|
| Amino Acid Sequence |
>hypothetical protein
MSGLPVSHVGEKVSGGVISTGSPTVHVGSSAVGLADRVSACVPLVGKPVNPMLGCKLLPEEVDFALAAPDTFTFARGYLSSNPRVGRLGQGWWLPGESMH LELGDEACVLVDAQGRRIAFPALAPGAQFYSGSEELWLRRGGSNREDGEVEAWRGRWAAVPAELRAQEASVLVLSGHSYLHFLRHPDGIWRLQASFGRAG YRTEYRWSGRGLLTGVRDSAGRSYALVYQQACAPSEGDDGLRLFGVILASHDGPAPDHIDPQDPGLDWLVRYQFNDSGDLIAVRDRLGQVVRVFAWHAHM LVAHGEPGGLEVRYEWDVHAPHGRVLKQIEAGGLTRSFRYLRDATEVSDSLGRVERYEFAGEGGQRRWTALVRADGSRTEFDYDLFGRLVALRDPLGRET RRRRDGQGRTLEEETPGKARYRKTLDEETGLLVELEDAMQRRWRFERDERGNPVTVHGPAGSTRYRYEDARLPDRPTRIVDPRGGERRLEWNRLGLLAAL TDCSGQTWRYEYDSEGRLTCETDPLGQVTRRRYDPLGQLIGLALADGSALGYAYDALGRQTRISDAEGRATLFSWGHGDLLALVSDASGRELSYQHDEAG RLLTLTNENGAQAHFRYDPLDRLVEETGFDGRRQRYRYNAADELVAREDADGRETAYAYDRDGRLASVRIPASDAAPALVERYRWLADGRLASAVGPDCE VRYEYDEVGNLRLESQLHADGWVYSVEHSHDELGMRQTSRYGDAPPVTWLTYGAGHLHGALVGAIELAFERDALQREVRRDARHGGKSDALFVQERRYGA LGRLQESRLRLAGGADWQRGYRYDGLGQLVGIDDNQQPAVRYEYDLAGRLLGSRRAGLPDRRYHYDAAGNRLDDEVANRREAGRQAFEHNELYRSGFTRS ASGESETGEAPQRWLGNRVQRIAGNRYHFDAQGNLVERVGADGERLRLAYDGAQRLVRLTREAADGTRVEARYRYDALSRRIAKSVLRDGVEQQVRFGWD GDRQCAEAFERQLRTTVHEPGGFVPLLRLEQAREPDTPELLELRRTFAAEGQPLPAQCVPELGEARFAFFHTDHLGTPLQLSDERGQLRWQGVAHDWRAV EPDREPGAQPIRFQGQYHDEESGLYYNRYRYYLPEAGRYASQDPLGLGGGPNPYTYALNAPSVAYDPTGLIIPLVVIGAFAARAAIGAALGAGIELGMQT GKQVLGQMKDNWDNDRDLTDIKWKCIDINWKHVGASAAIGTVAPGMLSTGKTVVQSARAIRTLSGQAANTANRAAKLAARKAAHADTIKKAVATQAAWQT GKQIVKCPLKDEEEECPPQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|