Pseudomonas aeruginosa PA7, PSPA7_3949
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCTCCGCCTGCTGGCCCAGGGCAAGAGCAACAAGGAGATCGGCCGCGTCCTGGACATCTCCCACTACACCGTGCGGATCCATGTCTCGTCGCTGCTCAAG GCGCTCGACGTGCCCTCGCGCACCGCCGCGGCGGTGAAGTACCGGGCGGCGCTGGGCGATGGGGAAGGGAAGTAGTGGCGGCGCCGGAATCGGGTCTGCG ACGGCGGCAGGCGGTGGCCGCTCATCTCGCCGTTTCGCCGGCCTGGAGCCAGCAGTGCCGAAAGGCAAGGCCGTCCGATAACTGCAAGAGCATTGTGGCG ACGGCCTGCGCAGTCCCTTGGCTGGCCATGTGAAACGGAAGCGGGCCCAACAGAGTCGCTCCCGACTGGCAAGCAACTTCAGAATTTTCTGCGCATACGT TCGAAAGCAGACTTGCTAGAGTCCCCGCTCCATGTCCGCGCGGCAGCATTTTTACAAGTGCTGCTTGCACCTGGGCGGTCCGGCTTAAGGAAAAGCAAGA
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| DNA Sequence for Gene |
>PSPA7_3949
ATGTTCGCGCCAGCCAATAGTGCGCACTTTGCGCTATCGATCCCCTCCGTACGCAACGACTTCAAGGTGCTGGCTTTCGATGGCACCGAAGCCATCAGCA CCCTTTATTCCATCCGCATCGAACTGCTCAGCGAGAACCCCGATTTCGACCTGGAGGGTTTGCTCGGTCAACCGGCGTTTCTCCAGTTCGGCCTGAGCGG CGAAGGGATCCATGGGCATATCGAAGACGTGTACGTGGGCGAAGCCGGTAGGCGCCTGGCGCGCTATCACCTGACCCTGGTGCCGGTATTGCACTACCTG CAGTTCAGCTTCAACCAGCGCATTTTCCAGCACCTGACAGTACCGCAGATCATCGCCCAGGTGCTGGCAGGCCATGGTATCCAGCCTGATGTCTACGTCT TCAATGTCCACACCAGCCCGGAACGCGAATACTGCACTCAGTACGGTGAAAGTGATTTCGATTTCATCCAACGGCTGTGTGCAGAGGACGGCATCGCTTG GCACCACCAGCATTCAGCGGATACTCACCTGCTGGTGTTTACCGAGGACCAGGCCTGGTTCCCCTTGCTGGGATGTACGCCATACCGCCAGGATACTGGG ACGGTCGCCGATCATCCGGTGGTCAATCGGTTTTCCCAGCGTTTCAGTTCCCGCACCAGCAAGGTGACTCGCCGCGACTACGACCTGAAGCGGCCAAGCC TGTTGCTGGAAAGCCAGTTCACCGCGGAGTTCGAGCCGGCCCTCGAGGACTATCGTTATCCTTCGCCGATCACCACGCTGGAGCGTGGGCAGGTGTTGGC CAGACAGGCTCTGGAACGGCATCGTGTCGATTACCAGCTGGCCGAAGGCCAGAGCGATCAGCCGACGTTGCGCAGCGGTCACTTCTTCAAGCTGACCGAA CATCCGCGCAAGACATGCAACGAACTGTGGTTGTTGCTGAGCGTCACGCACTCTGGTCGGCAACCCCAGTCACTCGAAGAGTCCGTGCCCGGCGATAGCC AGGCAGAAGACCGCTTCACCCAGGGTTATCGCAATACCTTCACCGCCATTCCATGGGATGTGTTTTTCCGGCCGCCGCTGCTGACGCGCAGGCCCCTGCC GGGATGCCAGACCGCTCGGGTCACCGGTCCGGCCGGCGAGGAAGTCTTCTGTGATGAATACGGGCGGGTGAAGGTCGAACTACATTGGGACAGACGGGAA CTGGGAAGCGACAAAAGCAGTTGCTGGCTGCGGGTTGCTTCCAGTTGGGCAGGTGAGCGTTTCGGCGCGGTGACCATCCCGCGCATTGGCATGGAAGTGG TGGTGAGCTTCCTCGAAGGCAACCCGGACTGCCCGTTGATTACCGGTGTCGTGCCGAACAAGACCACACCTGTTCCCTACGCGCTGCCGGCGAACAAAAG CAGAACCGTATTACGTAGTCGAAGTACGCCGAACAGCGGCGGCTACAACGAACTTTCGATCGAAGACCGGGCAGGCCAGGAAAAGATCTTCCTGCGCGCG CAGCGTGATATCGAGCAACTGATCCTCAACGACAGTCACACCAGCATCGGCAATGACCGTCACGAACGGATAAGCCGGGACAGCCGCAGCCTGGTCGAAA AAGACCGCTTTGAGCAGGTGAACATGAACAGTTCCAGCCTGATCAAGGGCGATGAGCTGCATACCACCCAGGGTGAGCGCAACACCCGGATCGGCGGCAA CGAACTGCTTTCCATCACCGGTGCCGGCAGCATCGCCGTGGACGGCACCTGGGTCGTGCAGGCCGGATCACAGGCTCGCGTCACCGCCACCAATGTGGTG GTCGATGCCGACATGAACCTGACACTCAAGGCCGGTGGACAGCATATCGTCATCAACTCCGCGGGGATTTTCAGCAGCGTGCCGATCGTGCAGGGCGGAG CCCCCATGGCCGGCATCGCTCCGCAGCAGGCGCTCCAGGTTCTGGCCGAAGCACCACAGACCGTCGTCGCCAATTCGCTGCCTCTCGTGGCTGCCGCCAG GCAACGTGCCGCGGACTTCTGCCCGCTCTGCGAAATCTGTCGCGATGGACTGTGCAGTGTTGGAGGTGCCGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCACGGCCGAACAATGGCTGCAGAAGCAAGGTGAGCTGGGCCGATACCTGTATCTGCTACTGGACTCCGATGGCCAGCTCGACGAGCGCGATGCCTTGCT CGAAGGGCGCGAACCCCACCAGTACGGCAATCTGTATAGCGGTACGCCCGCCAGTTCGCTGGCGGCGATAGGTCCCTACCTGTTCCGGCTCGATGCGCTG GACCATCCGGTCATTCAGGCGTTGCTCAAGTCGCCCGAACGTCATTGGGGCTGGCTGGCCAGCAGCGCGAGCAGTGATCTGGAGTCGCTGGCCCGGCATT GGCGCGCTCGCCTGGTAACGGGCGAGCGGCCGAACCAGGCGCTTTATCGCTTTCACGACAGTCGCGTGCTGGGTCGCGCCCTGGCCCACCTGCAGCCGGA GCAGCGCCCGGCGTTCCTTGGGCCGATCTCCAGCGCGTGCTACTGGCTGGCCGGGCGATGGCTCCATGCCGACAACCCCGCCCCTGGCGACCATCCCGTG
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| Amino Acid Sequence |
>Rhs element Vgr protein
MFAPANSAHFALSIPSVRNDFKVLAFDGTEAISTLYSIRIELLSENPDFDLEGLLGQPAFLQFGLSGEGIHGHIEDVYVGEAGRRLARYHLTLVPVLHYL QFSFNQRIFQHLTVPQIIAQVLAGHGIQPDVYVFNVHTSPEREYCTQYGESDFDFIQRLCAEDGIAWHHQHSADTHLLVFTEDQAWFPLLGCTPYRQDTG TVADHPVVNRFSQRFSSRTSKVTRRDYDLKRPSLLLESQFTAEFEPALEDYRYPSPITTLERGQVLARQALERHRVDYQLAEGQSDQPTLRSGHFFKLTE HPRKTCNELWLLLSVTHSGRQPQSLEESVPGDSQAEDRFTQGYRNTFTAIPWDVFFRPPLLTRRPLPGCQTARVTGPAGEEVFCDEYGRVKVELHWDRRE LGSDKSSCWLRVASSWAGERFGAVTIPRIGMEVVVSFLEGNPDCPLITGVVPNKTTPVPYALPANKSRTVLRSRSTPNSGGYNELSIEDRAGQEKIFLRA QRDIEQLILNDSHTSIGNDRHERISRDSRSLVEKDRFEQVNMNSSSLIKGDELHTTQGERNTRIGGNELLSITGAGSIAVDGTWVVQAGSQARVTATNVV VDADMNLTLKAGGQHIVINSAGIFSSVPIVQGGAPMAGIAPQQALQVLAEAPQTVVANSLPLVAAARQRAADFCPLCEICRDGLCSVGGAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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