Pseudomonas fluorescens AU6308, MZ32_RS21235

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU6308 Scaffold_160, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAAGCTGTTCGTGCAGGAAGGCCGCAAGGTATTCCGCGATGTTTGCCCGATGGTGGCCGAACTGATCGGCGAACACTTGGCAGAAAACCAGCTGAGTGTC ACTGATGTGAAGCGTTTCTGGCTGCACCAGGCCAACCTGAGCATGAATCACTTGATCGTGAAAAAACTGCTGGGACGCGAGGCATCGGTGGAAGAAGCGC CGGTGATCCTCGATACTTACGCCAATACCAGCTCGGCCGGCTCGGTGATTGCGTTTCACACTTATCAGGATGACCTGCCCAAGGGCGCGGTTGCCGTACT CAGCTCCTTTGGCGCCGGGTATTCGATTGGCAGTGTGATCCTGCGCAAACGCTGAGTGTGTGGCCGGACGCGGTCAACTGTGGGAGCTGGCTTGCCTGCG AAGGCATCGGCTCGGTGTGCCTGAATCACTGAGTTGTCTGGATCGCAGGCAAGCCAGCTCCCACATTGAGCGTATTTCCACGGCAATATTGAGGTAATCG
DNA Sequence for Gene
>MZ32_RS21235
ATGGCAGCAGCGGACGATGCGCACCTGCTTGAACGCCTGCTCAAGGGTGAGCAGCGGGCTTATAAGGATTTGGTCAACACTTACCAGAGTGCGATGCGGG CAGTGGCGTATGCCATCGTCGGCCAGCGCCATGCCGATGAGGTGGTGCAAGATGCCTGGCTCTCGGTGGTGCGCAACCTGGCCAAGTTCGAAGGGCGATC GAGCCTCAAGACATGGTTATTGACGATCACTGCCAACTCCGCAAAGAGCCGTTACAAACAAAATCGTCGGGAAGTCCTTCTCGACGATTTGCCCTCACCC CACGGCACCATTGGCGATGAACGCTTCAGCCCGGATGATGGCCATTGGGCTGTCGCCCCTTACGCTTGGCACCAGGACACCCCGGAAGCGCTGCTGACCG AAGATGAACTGCGCAAATGCCTGGAGCATACGATTCTGAGTTTGTCCGAATTGCAAAGCAGTGTGCTGGTCCTGCGTGAACGCCAGGGCCTGGAACTGGA AGAAATCTGTAATCTTCTGACCCTTTCACTCTCCAACGTCCGTGTGCTGTTGCATCGAGCGCGGCTTAAAGTCTTCGCCACGGTGGAGCATTTTGAGGAA ACGGGCGAATGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCTGTAAAGAACAAGTAGCGCGTTCCAGTGACTATCTCGATGGGCAATTGACCTTTTGGGAGCGTCTGCTGGTGCGTCATCACTTGATGTTTTGTCCGAA CTGCCGGCGCTTTATCCGTCAGATGCGCCTGATGCAGGCAACGCTCAAGCGTATGCCGCAGGAGCCGGTGGAGGGTGTTGATGCGCTGGCCGAACAATTG GCGGCTGAGCGGCGTAAAGATATGTAGGAGCGAGCTTGCTGTGGCGAGGGAGCTTGCTCCCGCTCGACTGCGCAGCAGTCGCAGGCTTTTGGGGGCGCTT CGCACCCCAGCGCAAGCAAGCTTGCTCGCCACAGCA
Amino Acid Sequence
>RNA polymerase subunit sigma-24
MAAADDAHLLERLLKGEQRAYKDLVNTYQSAMRAVAYAIVGQRHADEVVQDAWLSVVRNLAKFEGRSSLKTWLLTITANSAKSRYKQNRREVLLDDLPSP HGTIGDERFSPDDGHWAVAPYAWHQDTPEALLTEDELRKCLEHTILSLSELQSSVLVLRERQGLELEEICNLLTLSLSNVRVLLHRARLKVFATVEHFEE TGEC
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site