Pseudomonas fluorescens AU6308, MZ32_RS22780
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU6308 Scaffold_150, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGGCTAGAACTGACTCAAGGATTTATATTGAGTTCAATACTCATCGTCATGTTTACAGACGTTTCTGACAAAACAACGACGATCTCAACGGATATACCC ACAGTGATCCTACCCGCCGATACGCCACAAAGCCCCGCCGAGATGCGCCGCACCGCACTCTACCTGACGTTGTCGCAGGTGCCCGAAGGCTGCGTGGTGA GTTACGGCGAGCTGGCCCACCTGGCCGGTTTGGGGCGGGCTGCCCGCTGGGTCGGGCGCACCCTGAGCCAGTTGCCGAAAGACACGCGGTTGCCCTGGCA TCGGGTGCTGGCTGCCGGTGGTCGGATAAGTTTGCCGGTGGGCAGCGCCTCGGGTGACGAACAACGTGCGCGTTTACGTAGCGAAGGCGTCACCATCCTG AACAATCGTGTTGATATTCAGCGTCATGGCTGGCGCCCGGTAGAGCACAGCGGTTAGAGTGCGCGCTTTGTTTCCGCAAATCTGAGGCAGACTCCAGCCC
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| DNA Sequence for Gene |
>MZ32_RS22780
ATGCCCCGTAAAACCTGGCGCGCCGCGCTCGCCGCCTATGCCAGCCCTTCGACGTTAGTGCTGTTGTTGCTCGGTTTCGCCGCCGGCATGCCTTACATGT TGGTGTTCTCGACGCTTTCAGTGTGGCTGCGTGAAGCCGGTGTGGCTCGCGAGACCATTGGCTATGCGAGCCTGATCGGCCTGGCCTACGCCTTCAAATG GGTCTGGTCGCCGCTGCTCGACCAATGGCGCCTGCCGTTGCTTGGCAAACTGGGGCGTCGTCGCTCCTGGCTGGTGCTGGCCCAATCGCTGGTGATCCTC GGATTGATCGGCATGGGCTTTTGTGACCCGCAAAAACACCTGTCCTGGTTGATCGCCATTGCGGTGGTCGTCGCCTTCGCGTCGGCCACGCAAGACATCG CCGTGGATGCCTACCGCCTGGAAATCGCCGACGACAGCCGTCAGGCCGCCCTGGCTGCAAGCTACATGTCCGGTTATCGCATCGCCGCCCTGCTGGCCAC GGCCGGTGCGCTGTTCTTTGCCGAAGGCTTTGGCTCCACTGGCTTCAACTATAAACACTCGGCCTGGACCGGCACCTATGTGTTGTTCGGGGTGTTGATG GTGCCGGCGCTGCTCACCACCTTCCTCATGCGTGAACCTGATGTGCCACTGCGCACCCAGTTGCAGGCCGGACGCTACAGTTTCATGCACCAGTTGGTGT CGGTGTTTGTACTGATCGTGCTGTTGGTCTCGGTGCCGGCGATGTTCACCCAGTTGTACAACACCGACTTCGCCAGCGTGCTGTTCCAGGGCGTGAGCTT GTGGGAACTGCTGATGGAAGACCGCGCGTTCCTGCGCGCCATCCTCTATATCATCCTCACTACCCTGTGCCTTTCAGCCATGGGCCGCCGGGGCCTGGCG CCCGTGCTCACGCCGGTCAACGACTTTATCCTGCGCTACCGTTGGCAGGCGCTGCTGCTGCTCGGGCTGATTGCCACCTATCGCATGTCCGACACGGTGA TGGGCGTCATGGCCAACGTGTTCTATATCGACCAGGGTTTCACCAAGGACCAGATCGCCGGGGTGAGCAAGATCTTCGGCCTGATCATGACCCTGCTCGG CGCCGGCATGGGCGGCCTGTTGATCGTGCGGTTCGGGATACTGCCGATCCTGTTCATCGGCGGCGTGGCCTCGGCCGGTACCAACCTGCTGTTCGTGATG CTCGCCGACATGGGCCCCGACCTGCAGATGTTGATCGTCACCATCTCCCTGGACAACTTCAGTTCGGGCATGGCCACTTCGGCGTTCGTGGCGTACCTGT CGAGCCTCACCAACCTCAAGTTCTCCGCCACCCAATATGCGCTGCTCAGTTCGATCATGCTGTTGCTGCCGCGTTTGATCGGCGGCTATTCAGGGGTGAT GGTGGAGAAGTTCGGTTATCACAACTTCTTTATGATCACCTGCCTGCTGGGTGTGCCGACGCTGCTCCTGATTGCGCTGCACTGGTTCCAGGAGAACCGC CGCGCCCGACTGAATCCCCCGCCGGAAGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TACGACTCGGTCAATGTGGGAGCTGGCTTGCCTGCGATAGCGGCGTTGGGTTCACCATCGCTATCGCAGGCAAGCCAGCTCACACACAAGCGACGGTTAC GACAGATACACCCAGCTACCTCACGCCTGTACTCCGGCGACAAGCGCCCGTACAATCCCAAGTCATTTCAAGTCCAAGCAACCGACAACGGCCTACCATG CGTACCAGTCAATATTTGCTCGCCACACAGAAAGAAACGCCTTCCGACGCGGTTGTGATCAGCCATCAGCTGATGCTGCGCGCCGGTATGATCCGCAAAC TGGCCTCGGGCCTGTACACCTGGTTGCCCATGGGCTTGAAGGTGATGCGCAAGGTCGAAGCCATCGTTCGTGAAGAAATGAACGCGGCCGGCTCTCTGGA AGTGTTGATGCCGAGCACCCAACCGGCTGAGTTGTGGCAGGAATCCGGGCGCTGGGAAGAGTACGGCCCTGAGTTGCTGCGCTTTAAAGACCGTCATGGC
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| Amino Acid Sequence |
>permease
MPRKTWRAALAAYASPSTLVLLLLGFAAGMPYMLVFSTLSVWLREAGVARETIGYASLIGLAYAFKWVWSPLLDQWRLPLLGKLGRRRSWLVLAQSLVIL GLIGMGFCDPQKHLSWLIAIAVVVAFASATQDIAVDAYRLEIADDSRQAALAASYMSGYRIAALLATAGALFFAEGFGSTGFNYKHSAWTGTYVLFGVLM VPALLTTFLMREPDVPLRTQLQAGRYSFMHQLVSVFVLIVLLVSVPAMFTQLYNTDFASVLFQGVSLWELLMEDRAFLRAILYIILTTLCLSAMGRRGLA PVLTPVNDFILRYRWQALLLLGLIATYRMSDTVMGVMANVFYIDQGFTKDQIAGVSKIFGLIMTLLGAGMGGLLIVRFGILPILFIGGVASAGTNLLFVM LADMGPDLQMLIVTISLDNFSSGMATSAFVAYLSSLTNLKFSATQYALLSSIMLLLPRLIGGYSGVMVEKFGYHNFFMITCLLGVPTLLLIALHWFQENR RARLNPPPED
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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