Pseudomonas fluorescens AU6308, MZ32_RS22350

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU6308 Scaffold_150, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGTATTATACGCGCCACCACACAGCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCCACACGACCCAC CATTTTTGGCGGTTTAGAAAATCCGGAAGGCCCACGCAAGTGAGGATTTCCGGGTTTTTTTTTGCCTGTGATTTGGCCTGCCCGAGTCGACGTTGGGTCA ACGTCTGCGCAAATTTCCGTTGTCGTCCAAAAATTCCTTAAATTCAAATATTCATATGCGGACCGGTGCTGACCCAATAGTCCGGGCGTTCGTGTGGGTG CTCGATGTGTATCAAATCTGATACCGCTGGTCGGAAAACAACCAATAACTTCAAGCAATATCCATTCTTATTCGATTATTTTCTTTATTTGTCAGCTAGT TACAGTTTTTTTAGGGTGTTACCCAAAGGTGGGTCAGATTATTGGCGAGAAAGGCGGTCGATGTTAGTTTGCCACCCTTCGTAAATTCGATGGATCGAAC
DNA Sequence for Gene
>MZ32_RS22350
ATGAATTCCCAACCGCCACGGACTCGGTATTCACTGAGCATTGCCCTGCTTGTCTGCCTCGCCTCCCCCAGCGTGATGGCGGCAACCCTTCCGGGTGATC AGGACCTGATCCGCGACCGGCAAAACCGCCTGTTGGAAGATCAGCAACGCCGCCTTGAACAACTCAAGGAACTGCCCGGCAAAGAGGCCAGGCCCGAAGC GCCAGCAGCCCCGGTGGACAGCCGTTGCTTCCCGATCCAAACCATTGAACTCCAGGGGGCCGACCACCTGCCTGCCCCTGAACGCGAGCGTCTGCTCAAA CCGTACACCGGTCAATGCCTGGGCGTCTCACAACTCAACGCCCTGCTCAAAGACCTCACCGACTTCTACATCGACAAAGGCCTGATGACGAGTCGCGCCT ACTTGCCGCAACAGGACATGTCCAAGGGGCATCTGCAAGTGCTGGTGGTGGAGGGCAAACTCGAAGGCTTGAAGGGCGCCGACAACAGCAAGTTGACGGA CCGCGAGCTGGCCATGGCCTTTCCCGGCAAAAGCGGCGAGATATTGAACCTGCGAGAAATCGAGCAGGCCGTCGACCAACTCAATCGCTTGCCGTCCAAT CAAGCCCAGATGGAGCTGACCCCGGGCGAGGCCGTGGGCGGCAGCTCGGTATTGGTCAAAAACAACCCGCAAAAGCCATGGCGCGCCAGCCTTTCACGTA ACAACGACGGCCAGAAAAGCACCGGCGAACAGCAGTGGGGCACCGGCTTTGAATGGGACAGCCCGCTGGGCCTGGCCGATCAGCTGATTCTGCGCGGCGG CCATGACGCGGTCAGCGACCATCAGAAAACTTCCAAGAACGCGATGCTCTACTACAACGTGCCCTGGGGCTGGTGGAACTTCAGCTACAGCTACAACCAG AGCGACTACCGTTCGGTCGTCCAGGGCGACGGTTTCGACTTCAAGCAAACCGGTGACAGTGAAAACCATCAGTTACGCGCTGAGCGGGTGATCCACCGTG ATGCCGTGAGCAAGACGTCGCTCAACGTCGGCCTGTCCCACCTGCGCACCAACAACTACATCGATAGCAGCCGCCTCAAAGAGAGCAGCAACCGCCTCAG TGAACTGCAGTTGGGCATCAACCATGGTCGTCGTATCGGCAGTGCGTTCGTCAACGTCGATGTGGGCATGCAAAACGGCACCGGCGCCTTCGACGCCCAA GGCAATCACAACCCCCTGCCTGGCGTGCCGGATGCGCGCTACCGCAAATACACCGCCACCGTCAGCTACCTGCAACCCTTCACGCTGTGGGGCGAGTCGT TCAGTTTCACCAGCCTGGCCACCGGCCAACGCAGCGAAGACGTGCTGTTCAGCCCCCAGCGCATGAGCCTCGGTGGCTCGGCGTCGGTACGCGGCTACAA GGATCAGCAACTGACCGGCGACAGCGGCGGTTACTGGCGCAATGACCTGCGCTGGAGCCGCCCGGTGACCCTCGGTTGGCTGCGCCCGGTGTTCGGCGAG TACGGTGCCAGCGTGGGCTACGACCAGGGCGTGATCCGCAATGGTCGCTACAACGGCGAAGTGCACGGCCGCGTCTCGAGCAACTCCCTTGAGCTGTTCG CCCGCGGCCAACACGTGAGCACCAGCGTGACCTTTGCCCACTCACTGGAACGACCGGCCGCGCTGCTTGAGCGCGAAGCACCGATCTACTTCCGCATGGA TTTCTTCCTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCAACGCCCAGTTGCAACGAGAATTTGAAATGGATGTTCGCCAATTTGCCTTCCTGGTTCGCCAGCCTTCTGCTGCCCTGAAAAGCCGTGACGCGTTCC TGGGCCTGCCCAAACGTGGCGTGGCGCTGATCCTGGCCAACGCGCTGTTCTGGCAACCGCTGCTGGCCCAGGCCGAAGGCATCGTGGTCAGCGCGCCGGG CACCACGGTCGGCCAGGCGGGCAATGGCGTGCCGGTGGTAAACATCGCCGCCCCCAATGGCAGTGGCCTGTCCCACAACCAGTTCAAGGACTACAACGTC GGCGCCAACGGCGTGATACTCAACAACGCCACCGACCGTACCCAATCGACGCAACTGGGCGGCATCATCCTCGGCAACCCGAACCTGCAAGGCCGCGCCG CCAACATCATTCTCAACGAAGTCAACGGCGGCAGTCCCAGCCAACTGCGCGGCTACACCGAAGTGGCGGGCCAGTCGGCCAAGGTCATCGTCGCCAACCC
Amino Acid Sequence
>ShlB family hemolysin secretion/activation protein
MNSQPPRTRYSLSIALLVCLASPSVMAATLPGDQDLIRDRQNRLLEDQQRRLEQLKELPGKEARPEAPAAPVDSRCFPIQTIELQGADHLPAPERERLLK PYTGQCLGVSQLNALLKDLTDFYIDKGLMTSRAYLPQQDMSKGHLQVLVVEGKLEGLKGADNSKLTDRELAMAFPGKSGEILNLREIEQAVDQLNRLPSN QAQMELTPGEAVGGSSVLVKNNPQKPWRASLSRNNDGQKSTGEQQWGTGFEWDSPLGLADQLILRGGHDAVSDHQKTSKNAMLYYNVPWGWWNFSYSYNQ SDYRSVVQGDGFDFKQTGDSENHQLRAERVIHRDAVSKTSLNVGLSHLRTNNYIDSSRLKESSNRLSELQLGINHGRRIGSAFVNVDVGMQNGTGAFDAQ GNHNPLPGVPDARYRKYTATVSYLQPFTLWGESFSFTSLATGQRSEDVLFSPQRMSLGGSASVRGYKDQQLTGDSGGYWRNDLRWSRPVTLGWLRPVFGE YGASVGYDQGVIRNGRYNGEVHGRVSSNSLELFARGQHVSTSVTFAHSLERPAALLEREAPIYFRMDFFL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site