Strain | Pseudomonas fluorescens strain AU6308 Scaffold_140, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGGAAAACCTGCTACGCCTGGCCGCTGGGGCGATCTCGCGCTTGCAGAGCCATCAACTGTCGAGCTTGGAACAGACCGGCACCACCGCCGACGGACGCC TGCAAACGACCTGGCAGTTGGAGATTCCCATGCGCACCCTGCAAGACATCGTGCCGCTGCAGGTCAAGTTCCAACGCGAGGAGCCCGCGCCAGACAAGGA CCAGCCCGAGCGCAAGGATAAAAAAGACCCGAAACAAATGCTTTGGCGCGTCGAACTGGCCTTTGACATGGAGCCGCTGGGGCCGTTGCAAGTTCAGGCG CAGCTGTCTCAGGGCAAACTGTCCAGCCAGCTATGGGCCAGCCGCCCTTTCACGGCCAGCCTGATCGAAAGCCACTTGGGCAACTTGCGTGAGCGCCTGG TCTCATCCGGGCTCAACGTCGGCGACCTGGATTGCCATCTGGGCACCCCGCCACGCGGTCCAAAAACCGGACTGGAGCAACGCTGGGTGGACGAAACCGC
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DNA Sequence for Gene |
>MZ32_RS12660
ATGAAAAACGCCGACCCGCCCCGCCAGGCCATCGCCCTCAAGTACGACGGCCAACAGGCCCCTACCCTGACAGCCAAAGGCGATGATGCCCTGGCCGAAG CCATCCTCAAGCTGGCACGGGAGAATGAAGTACCGATCTATGAAAACGCCGAGTTGGTAAAGCTGCTGGCGCGCATGGAACTGGGGGACAGCATTCCGGA AGAGTTGTACCGCACGATTGCCGAGATCATTGCGTTTGCCTGGACGTTGAAGGGCAAGTTCCCGGCCGGCTACGACCCGGAGGCGGGGCCGGTGGAGCGG GATGTCACTGAGCAGGGTGACGATTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTGCTCATAGGGCACATACACATCCAAATGTGGGAGCCGGCTTGGCTGCGATAGCCATCGGTACCTACACAACTTCGGCGCGACGCTGGATCTGTGGCGA GGGAGCTTGCTCCCTCGCCACAGGTTTTGCGTCGTTCAGAGGTTGTGTAAATACCTATGGCTATCGCAGGCCAACCAGCTCCCACATTTTTAGCGCGCGG TCAGTTAAGGACTTCGCTCAAAGGAATGAAGTTGACCCGGTCGCCGATGGCCAGCGTGGTCCCTTCCATCACCTCCACAAAGCCTTCAGCCCACGCCGCA CTGCGCAGCACCCCGGAGCTTTGGTTGCGGTAGATGATCGCCTTGCCCTGTTCGATCCGCCCGCGCAGGTACTCGCGGCGGTTGCCGGGCTTGGGCCAGA CGAACCCTGCCGGCACTTCGAAGCGCAGCGGCTGCACCTCCTGCACCCCTTGACGGCGCAGCAGATACGGGCGCGCCAGCAGCGCAAAAGTCACCAGGGT
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Amino Acid Sequence |
>flagellar biosynthesis protein FlhB
MKNADPPRQAIALKYDGQQAPTLTAKGDDALAEAILKLARENEVPIYENAELVKLLARMELGDSIPEELYRTIAEIIAFAWTLKGKFPAGYDPEAGPVER DVTEQGDDY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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