Pseudomonas fluorescens AU6308, MZ32_RS14025
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU6308 Scaffold_130, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGAGAGCAGGGCGAAGATTTCCACGGCGCGGGCCGAGGGCTCCATGCTGCGCCCGGTGCGCACGAACAGGGGATCATCGAACAGCCCGCGCAGGCGCGAC AACGCCGCGCTGATGGCCGGCTGGCCGAGGAACAATTTCTCGGCGGCGCGGGTCACACTGCGCTCATGCATCAAGGTTTCGAATACGATCAAGAGGTTAA GGTCGACACGACGCAGGTCGTTACGGTTCATCTTGTGTCCTGGAAGAGTCAGCAAACTTGATGTGAGCGGTCACGTAGCAACCCCCTGAGGTTCGATTCA GAAGGATGACCGGCATGAATCTTACGGGGAAAGGCTGGTACTCTGCACCGGCTAATTGATTTTTCCTACGATAGTTGAGGTGTGTTCCTCGCTCGCGGAA TCAATGACAGGCATGTCGACTATTAATGGTGACCGGTGGTCTTACCCCCAAAGCCCAGATAAAGTTCATGGCATTAGAGGTTACTTTGACGAGGTTTGCG
|
|
| DNA Sequence for Gene |
>MZ32_RS14025
ATGTCCCGCACGATCCGTTTTCACAAGTTTGGTCCGGCCGAGGTGCTCAAATGCGAAGAGCATGCGGCCGCGCAGCCCGCACCGGGCGAAGTGCAGGTGC GTGTCGACGCGATCGGCATCAGTTGGTACGACATTCTGTGGCGCCAGAACCTGGCGTCTTCTCATGCACGCCTGCCTTCTGGCTTGGGCCATGAGATGGC CGGGGTTGTGGTTGCCCTCGGCGACGGCGTGGATGACTTGGCAGTGGGCGATAAAGTCGCCAGTTTTCCGGCCGAGAGCCCCAATGATTACCCGGTGTAT GGCGAGCAAATCGTCTTGCCCCGTTCGGCCCTGACCCGGTACCCGGATGTCTTGAGCCCGATTGAAGCCAGCGTGCATTACACGCCGTTGCTCATCGCGT ACTTTGCGTATATGGACCTGGCGCGGGTCAAACCGGGCCAGTTTGCCCTGGTGACCGACGCCAGCCACTGTGCCGGCCCTTCGTTTGTGCAACTGGGCAA AGCCCTGGGTGTGCGGGTGATTGCTGCCACCAAAGACAGTGCTGAACGTGAATACCTGCTGTCCCTCGGGGCGGAAAAGGTCATCGTTACCGAAGAACAG GACCTGCTGATGCAGATCAACAAGTTCACGGACAACCGTGGCGTCGACGTGGTGTTCGATGGCCTGGGTGGCCCGCAGATGTCGCTGCTCGGTGACGTCC TCGCGCCGCGTGGCAGCCTGGTGCTGTATGGCCTGCAAGGTGGCAACCAGACGCCGTTCCCGGCCTGTGCGGCGTTCCAGAAGAACATTCAGTTCTTTGT GCACTGTATCGGCAACTTCACCGGCAAGCCGGAGCTGGGCATTATCCAGGACCAGGTGGCGTTGCAGCGTGCGTTGCGCGATATCAACCAGCTGACAGCC GACCGTGTGCTTGTCCCACTGAAAACCACGGTATTTCCGTTCAGTCAGTTCGTCGAAGCGCACCGATACATGGATGAATGCCCTTGCCGCGAACGGGTGG CGTTGCAGGTTGAAGCTGTTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCTGTAGGAGTATTCGCAAATGAATACTCCGGCGCCTGAGCTGATGAGGCAAATGCGCCATTTGACAGGGCTTAACCCGCACCGGGGTTGAGCCGCCGCA CGGGCGCTGCGCCCCGTAAACAATACCGTTATTGCCCTACGCCGCCCTGAAATCCAGTGCGGCGCTGTTGTGTGGGCGTCATTTAAGTTGGGTTGGCAGG CCATCTGAACTGCTTTTCGACGCTGTTCTGTATCTGTTAATCATTGTTTGAGTGCCGATAATTGAGCCTTCTTTGTCATCTCAAGGATTGAGCCATGATT GAATGCCGGGCATTAACATCTCGCGCTTGCGGAACTAACGAAGGTCTGATTTTTTTTTCGAAAAGTACAAAGTGTGCACCCCGTCGTTTTGCAAGAAGCC AGGATGAGTGGATGATTAATATTTGTCGGATGCTTCTCTAATTTCTTAGTTAAAGCAGTGTAGGACGTTGTCAGAGCCTTCCTAAGGCTGGCGGTCTTTG
|
|
| Amino Acid Sequence |
>alcohol dehydrogenase
MSRTIRFHKFGPAEVLKCEEHAAAQPAPGEVQVRVDAIGISWYDILWRQNLASSHARLPSGLGHEMAGVVVALGDGVDDLAVGDKVASFPAESPNDYPVY GEQIVLPRSALTRYPDVLSPIEASVHYTPLLIAYFAYMDLARVKPGQFALVTDASHCAGPSFVQLGKALGVRVIAATKDSAEREYLLSLGAEKVIVTEEQ DLLMQINKFTDNRGVDVVFDGLGGPQMSLLGDVLAPRGSLVLYGLQGGNQTPFPACAAFQKNIQFFVHCIGNFTGKPELGIIQDQVALQRALRDINQLTA DRVLVPLKTTVFPFSQFVEAHRYMDECPCRERVALQVEAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|