Pseudomonas fluorescens AU6308, MZ32_RS01355

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU6308 Scaffold_100, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GACGGCACCTTGCTGGACCTTGAGGGAGTGGGCCGTATGCTGCAACAGGCACTGTCGCGCCTGGGTACCTCGGCCCGGTACGCCGCCGTGGCGGTTGCGG GCCCGTCGGTAATTACCCGGCTGATTGACATGGACGCCGGCCTCAGTGATGAGGAAATGGCCTGGAAGATCCAGATGGAAGCCGACCAGTTCATCCCCTA TCCATTGGACGAGGTGGCCATCGACTTTCAGGTTCAAGGGCCATCGGCTCAAGGCCCGCAGTGGGTAGAGGTGATGCTGGCGGCGTGCCTGCGTGAGCAG GTCGAAGCGCGCGAGGCGGTTTTGGCCTTGGCGGGGCTGGTGCCGCGGGTGGTCGATGTAGAAGGGTTTGCATTGGAGCGCGCTTGCCTTCAGGATTTTG CCAGCTTCACGCCGGGTCATAGAGTCGATGGTGCACAATGGGCCTTGGATGCCCAAGGGATGGGAGTGGCTTGCGGGCTGGCCCTGAGGAGTTTCGCTGG
DNA Sequence for Gene
>MZ32_RS01355
ATGACACGAATCAATCTTTTGCCTTGGCGCCAGGCCCTCGCGGAGCGCAGGCGCAAATACCTGTTGGTGCTATTGCTGGCGTTTGCCTGCGTGGCGCTCG CGGCACTGTGGTTGGCTGATCAAGTGATCGACCAGGCGATAGACCGGCAGGTAAGCCGCAACAGCCGCCTGGAAGAGCACATCGCTACCCAGGACTCGCG GATCAGGACCATCGACGACTTGCAGGCGCGAAGCCAGCAACTGGCCGAACGCATGAAGGTGGTTCAGGACCTGCACGATGCCCGCTCTTCCGGTGCCCGA TTGTTCGAGCAATTGGCTCGCTCGGTGCCTGAAGGTGTCCATCTGCATGAGGTGGTTGCGAACGGCGACACCATCAGCATTCGCGGCACGGCAGAAAGCA ACCAGGATATCGCCCGTTTGATGCAGCAGCTCAAGCCAATCCACGGCTCCAGTTCGACCCGTCTGCAGCGCGTGCAATCCGAAGGTGCACGCGGCGAAAG TGAATTCCAGCTGATGGTGCGCCAGGGAGAGTCCAGTGAGGCGCAACCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTGCCCAGGCTCGATTTTTCCACGTTCTCTTACAACGCTGCCAAATGGTCCCTGCCGGGCAAGGTGCTGCTTGGCTGTGCGCTGGCCGGCATGGTGTT AGTGCTAGGCGAGGTTTCGCATGGGGGGCCGCAGCGGGAGCGATTGCACGGGCTTGAGGCGCGGGAGCAGGCGCTGCAGCAGCAACTCACAGAAAAGACC GGCCTGGCCGCGAGCCTTGAGCTGCGCACCCGGCAAGTCCGGAGCATGGAAGACAATCTCGCCAGCCTTCTAGGGCAATTGCCCGGCGAGTCCGAGGTGC CTGCCGTGCTGGAAGACATCGCCCGGCTGGCGGCTGTTCATGGGGTGTGGGTCGAAGGCATCACCGTGCTGGATGAAGCGCCTCGGCAGCTTTATATCGA ACAACCCATGCAGATAAGCGCGTCCGGGGTTTACCACGACCTGGCGAAGTTTGTCAGTGCCTTGGGTGGGGTGCCGCGGGTCGTTACCGTGCAGGATGTT
Amino Acid Sequence
>fimbriae biosynthesis protein
MTRINLLPWRQALAERRRKYLLVLLLAFACVALAALWLADQVIDQAIDRQVSRNSRLEEHIATQDSRIRTIDDLQARSQQLAERMKVVQDLHDARSSGAR LFEQLARSVPEGVHLHEVVANGDTISIRGTAESNQDIARLMQQLKPIHGSSSTRLQRVQSEGARGESEFQLMVRQGESSEAQP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site