Pseudomonas fluorescens AU6308, MZ32_RS01055
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU6308 Scaffold_100, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCGACTTCACCCCCCTGCGCACAGACCCCAAATGCCCCCAATGGCTGGCCGAGGCCGTGCACGAACCGCTGAATGATCCGCTGCGCCAACTGGCGATG ATCCGCGCCACCGCCGAGCTGTGCATCTACAAAGGCGAGTGACTGCAACCCCATTCAAACATGTGGGAGCTGGCTTGCCTGCGATAGCGATGTTGAATGC ACCACCGCTATCGCAGGCAAGCCAGCTCCCACACTGACTGCGATTCGCCTTAAATCTTCAGTTGCTGAACAACCTTCACAAAACCGCACTATATTGGTGC GATAGCCTGCACCCTTCTCAATTGCCCAGCCCATTTTGGTTCGAAACTTCCCGTTGAGGCTGGCAGAACGCCACAGTTTCGCGCCTCAAACCCTTATTTC AGGGCATTAGCGCTTCTTTTCGGAGCCTTGGTTTGGTTTTTGCATTTTCCTTGTATCAGCGTGTGCCTCAAGCCCACGCCTTGCTCCAAAAGAGGTCCCG
|
|
| DNA Sequence for Gene |
>MZ32_RS01055
ATGACCATCAGCGATGCACTGCACCGTTTGTTACTCGACAACCTGACCACCGCGACCATCCTGCTCAATGCCGACCTGCGCCTTGAGTACATGAACCCGG CGGCGGAGATGCTCCTGGCGATCAGCGGCCAGCGCAGCCATGGGCAGTTCATCAGCGAATTGTTCACTGAGTCGGCCGAAGCCTTGAGTTCGTTGCGCCA GGCCGTGGAGCAGGCACATCCGTTCACCAAGCGCGAAGCGATGCTCACCGCGCTCACCGGGCAAACGTTGACCGTCGACTACGCCGTGACCCCGATCCTG AGCAATGGCGCGACCCTGCTGCTACTCGAAGTCCACCCTCGCGACCGCCTGCTGCGCATCACCAAGGAGGAAGCACAGCTGTCCAAGCAGGAAACCAGCA AGATGCTGGTGCGCGGCCTCGCCCACGAGATCAAGAACCCGTTGGGCGGCATTCGCGGCGCGGCACAGTTGTTGTCCCGTGAGCTGCCGGACGAGCACCT CAAGGACTACACCAACGTCATCATCGAAGAAGCCGACCGTCTGCGTAACCTGGTAGACCGCATGCTCGGCTCCAACAAGCTGCCGTCCCTGGCGATGACC AACGTGCATGAGGTGCTGGAGCGGGTCTGCCAATTGGTCGAAGCCGAAAGCCAGGGCTGCATCACCTTGGTGCGCGACTACGACCCGAGTATTCCCGACG TGTTGATCGACCGCGAACAGATGATCCAGGCGGTGCTCAACATCGTGCGCAACGCCATGCAGGCCATCAGCAGCCAGAATGAGCTACGCCTGGGCCGCAT CAGCCTGCGCACCCGCGCCCTGCGCCAGTTCACCATCGGCCATGTGCGCCACCGCCTGGTGACCAAGGTCGAGATCATCGACAACGGCCCCGGCATTCCT GCGGAGCTGCAGGAAACCATCTTCTTTCCCATGGTCAGCGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATCACCCAGAACATCATCAGCCAGCACC AGGGCCTGATCGAATGTGAGAGCCACCCTGGCCACACCACGTTCTCGATCTTCCTGCCATTGGAACAAGGAGCCCCCACGACATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCCGTAGTGAAACTGTCTGGATCGTCGATGACGACCGTTCTATCCGCTGGGTCCTCGAGAAAGCCTTGCAACAAGAAGGCATGACCACCCAGAGCTTCGA CAGCGCCGATGGGGTGATGAGCCGCCTGGCACGTCAGCAGCCGGACGTGATCATTTCCGATATCCGCATGCCTGGCGCCAGTGGCCTGGACTTGCTGGCG CGCATTCGCGAGCAGCACCCGCGCCTGCCGGTGATCATCATGACCGCCCACTCGGACCTGGACAGCGCTGTCGCGTCCTATCAGGGCGGCGCCTTTGAAT ACCTGCCCAAGCCATTCGATGTGGATGAAGCGGTGGCGCTGGTCAAGCGCGCCAACCAGCACGCCCAGGAACAACAGAACCAGGAAGCGCCGCCGACCCT GACCCGCACCCCGGAAATCATCGGGGAAGCGCCGGCGATGCAGGAAGTGTTTCGCGCCATCGGGCGCTTGAGCCACTCCAACATCACTGTGCTGATCAAC
|
|
| Amino Acid Sequence |
>sensor histidine kinase
MTISDALHRLLLDNLTTATILLNADLRLEYMNPAAEMLLAISGQRSHGQFISELFTESAEALSSLRQAVEQAHPFTKREAMLTALTGQTLTVDYAVTPIL SNGATLLLLEVHPRDRLLRITKEEAQLSKQETSKMLVRGLAHEIKNPLGGIRGAAQLLSRELPDEHLKDYTNVIIEEADRLRNLVDRMLGSNKLPSLAMT NVHEVLERVCQLVEAESQGCITLVRDYDPSIPDVLIDREQMIQAVLNIVRNAMQAISSQNELRLGRISLRTRALRQFTIGHVRHRLVTKVEIIDNGPGIP AELQETIFFPMVSGRPDGTGLGLAITQNIISQHQGLIECESHPGHTTFSIFLPLEQGAPTT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|