Pseudomonas fluorescens AU6308, MZ32_RS26815
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU6308 Contig_55, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGCTGCTCAAAGTCACCACCCCGATCTCCGCCCAAGACACCGGCGGCAGTCTGCACGACCGCCTGGCTGAGCTGGGGCCGCCCGCCGTGATCCAGGCCA TCGCTGGCCTGGCTGCCGGCACCCTGCAAGGTGAAATCCAAGACGACAGCCTGGCCACCTACGCCCACAAGCTGAACAAGGACGAAGCGCGCATTGACTG GAGCCGCCCAGCCGTGGAGCTGGAGCGCCTGGTACGTGCCTTCAACCCATGGCCGATCTGCCACAGCACCCTGAACGGCGAAGCCTTGAAAGTGTTGGCC GCGACCCTGGCCGATGGCGTAGGCGCTCCCGGTGAGATCATCGGCGCCAGCAAAGACGGCCTGTTGGTGGCTTGCGGTGAACAGGCGCTGTGCCTGACGC GTCTGCAATTGCCCGGCGGCAAGGCGCTGAACTTCAGCGATTTGTTCAACAGTCGTCGTGAGAAATTCGCCCTGGGCACCACGCTTGGAGTGGTCACTCA
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| DNA Sequence for Gene |
>MZ32_RS26815
ATGAACCCACGTCTGGCCGCCGCCAAGGCTCTCGCCGCTGTGCTCAATGGCAAGGCTTCGCTCAACAGTTCTCTGCCGACGCAGTTGGATAAGGTTGAAG ACCGCGACCGCGGGTTTACCCAGGACCTGGCCTTTGGCACCGCCCGTTGGCAGCCACGGTTGTCTGCGTTGGCCGCCAAGCTGCTGCAAAAACCGTTCAA AGCGGCGGACGCGGATGTCGAGGCGCTGTTGCTGGTGGGCCTCTACCAGTTGCTCTACACCCGCGTGCCGGCCCACGCCGCTATCGGTGAAACCGTCGGT TGCGCCGACAAGCTGAAAAAGCCCTGGGCCAAGGCCCTGCTCAATGCCGTGCTGCGCCGCGCCCAGCGTGAAAGCGAAACGCTGTTGGCCGAGCTGGAAC ATGATCCGGTGGTGCGCACCGCCCACCCGCGCTGGCTGCAAAAATCCCTGAAGGCCTTTTGGCCCGAGCAATGGGAGGCTATCTGCGCGGCCAACAACGC ACACCCGCCGATGATCCTGCGGGTCAACCGTCGCCACCACAGCCGGGATGCATACCTGCAATTACTAGTCGGCGCGGCCATCAACGCCACCCCGTGCGTG TACAGCACGGACGGTATCGTGCTGGAAGTCGCCGCCGATGTACGCAGCCTGCCGGGCTTTGCCGAAGGCTGGATCAGCGTGCAGGACGAGGCCGCGCAAT TGGCTGCCGATCTGCTCGATTTGGCCCCAGGCCAGCGCGTACTCGACGCCTGCTGCGCGCCAGGCGGTAAGACGTGTCACATCCTTGAGGTTGAAAAAGA CCTGGCCGGTGTGGTGGCTGTGGACCTTGAGGCCAAGCGCCTGGTGCGCGTGCGGGAAAACCTTGCACGCCTGGGCCTCAACGCCGACCTGATCGCCGCC GACGGCCGCGACACCGCCACCTGGTGGGACGGCAAGCCATTCCAGCGCATCCTGCTGGACGCTCCTTGCTCCGCCACCGGCGTGATCCGCCGTCATCCGG ACATCAAGCTGACCCGCCAGCCCGACGACATCGCCGCCCTGGCGGTGTTGCAAGGCGAACTGCTCGACGCGCTGTGGCCGACTCTGGAAGTCGGCGGCAT CCTGCTTTACGCCACCTGCTCCACGCTGCCCACCGAAAATACCGAGGTCATCCAAGCTTTCCTCGCCCGCACCAGCGGCGCGCGCGAACTGGACCTCGCC ACTAGCGCCGGTATCAAGCAGCCCCACGGTCGCCAACTGCTCGCGCAGGAAGGCGGGCACGATGGCTTCTACTACGCCAAACTGATCAAGATCGCTGCCG CGCGCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATGGTTTTAAGGGAGTGACCGGATGAAAATCATCATCCTTGGAGCAGGGCAGGTTGGTGGCACGCTGGCCGAACATTTGGCCGGTGAAGCCAACGACATC ACCGTGGTCGACACCGATGCCGAGCGCCTGCGCAACCTGGGCGACCGCCTGGACATTCGTACGGTGCAAGGTCGCGCGTCGTTTCCGACGGTGCTGCGTC AGGCCGGTGCCGACGATGCCGACATGCTGGTGGCTGTGACCAACAGCGACGAGACCAACATGGTCGCCTGCCAGGTCGCCCACACCCTGTTCCACACCCC GACCAAGATCGCTCGGGTGCGGGAAGCGGCTTACCTGACCCGCGCCGGGTTGTTCGACAACGACGCCATTCCGGTGGACGTACTGATCAGCCCGGAACAG GTGGTGACCCACTACATCAAGCGCCTGATCGAAATTCCAGGTGCGTTGCAAGTCATCGACTTCGCCGAAGGCAAAGCGCAACTGGTGGCAGTGAAGGCCT
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| Amino Acid Sequence |
>16S rRNA methyltransferase
MNPRLAAAKALAAVLNGKASLNSSLPTQLDKVEDRDRGFTQDLAFGTARWQPRLSALAAKLLQKPFKAADADVEALLLVGLYQLLYTRVPAHAAIGETVG CADKLKKPWAKALLNAVLRRAQRESETLLAELEHDPVVRTAHPRWLQKSLKAFWPEQWEAICAANNAHPPMILRVNRRHHSRDAYLQLLVGAAINATPCV YSTDGIVLEVAADVRSLPGFAEGWISVQDEAAQLAADLLDLAPGQRVLDACCAPGGKTCHILEVEKDLAGVVAVDLEAKRLVRVRENLARLGLNADLIAA DGRDTATWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQPDDIAALAVLQGELLDALWPTLEVGGILLYATCSTLPTENTEVIQAFLARTSGARELDLA TSAGIKQPHGRQLLAQEGGHDGFYYAKLIKIAAARG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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