Pseudomonas aeruginosa PA7, PSPA7_3528 (cobA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0019354 siroheme biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd11642
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008168 methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.1010.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other PA7 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pap00860 Porphyrin and chlorophyll metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pap01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pap01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd11642 SUMT IPR006366 Uroporphyrin-III C-methyltransferase 8 232 4.67866E-116
FunFam G3DSA:3.40.1010.10:FF:000001 Siroheme synthase - - 1 117 1.7E-45
Gene3D G3DSA:3.30.950.10 - IPR014776 Tetrapyrrole methylase, subdomain 2 118 239 3.9E-37
Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IPR000878 Tetrapyrrole methylase 4 212 9.6E-45
FunFam G3DSA:3.30.950.10:FF:000010 Uroporphyrin-III C-methyltransferase - - 118 240 4.4E-64
NCBIfam TIGR01469 JCVI: uroporphyrinogen-III C-methyltransferase IPR006366 Uroporphyrin-III C-methyltransferase 3 234 2.4E-92
PANTHER PTHR45790 SIROHEME SYNTHASE-RELATED - - 2 234 7.9E-82
Gene3D G3DSA:3.40.1010.10 - IPR014777 Tetrapyrrole methylase, subdomain 1 1 117 1.7E-39
SUPERFAMILY SSF53790 Tetrapyrrole methylase IPR035996 Tetrapyrrole methylase superfamily 1 235 8.77E-70

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.