Pseudomonas aeruginosa PA7, PSPA7_3496 (clpP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0071978 bacterial-type flagellum-dependent swarming motility
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1801
 ECO:0000249
sequence similarity evidence used in automatic assertion		 22123702
Biological Process GO:0044011 single-species biofilm formation on inanimate substrate
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1801
 ECO:0000249
sequence similarity evidence used in automatic assertion		 22123702
Biological Process GO:0071236 cellular response to antibiotic
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1801
 ECO:0000249
sequence similarity evidence used in automatic assertion		 22123702
Biological Process GO:0044010 single-species biofilm formation
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1801
 ECO:0000249
sequence similarity evidence used in automatic assertion		 22123702
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00444
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004252 serine-type endopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00444
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004176 ATP-dependent peptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00444
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Chaperones & heat shock proteins Other PA7 genes in this class
Cell wall / LPS / capsule Other PA7 genes in this class
Motility & Attachment Other PA7 genes in this class
Antibiotic resistance and susceptibility Other PA7 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00127 Clp protease catalytic subunit P signature IPR001907 ATP-dependent Clp protease proteolytic subunit 35 50 2.0E-52
PRINTS PR00127 Clp protease catalytic subunit P signature IPR001907 ATP-dependent Clp protease proteolytic subunit 75 95 2.0E-52
PRINTS PR00127 Clp protease catalytic subunit P signature IPR001907 ATP-dependent Clp protease proteolytic subunit 127 146 2.0E-52
Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. IPR001907 ATP-dependent Clp protease proteolytic subunit 19 209 43.668056
FunFam G3DSA:3.90.226.10:FF:000001 ATP-dependent Clp protease proteolytic subunit - - 18 210 6.8E-103
NCBIfam TIGR00493 JCVI: ATP-dependent Clp endopeptidase proteolytic subunit ClpP IPR001907 ATP-dependent Clp protease proteolytic subunit 19 207 3.3E-104
Pfam PF00574 Clp protease IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA 29 208 4.9E-88
SUPERFAMILY SSF52096 ClpP/crotonase IPR029045 ClpP/crotonase-like domain superfamily 27 210 1.56E-75
PANTHER PTHR10381 ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA 18 211 2.2E-98
CDD cd07017 S14_ClpP_2 IPR001907 ATP-dependent Clp protease proteolytic subunit 35 205 1.35498E-103
PRINTS PR00127 Clp protease catalytic subunit P signature IPR001907 ATP-dependent Clp protease proteolytic subunit 184 203 2.0E-52
Gene3D G3DSA:3.90.226.10 - - - 12 212 2.6E-89
PRINTS PR00127 Clp protease catalytic subunit P signature IPR001907 ATP-dependent Clp protease proteolytic subunit 106 123 2.0E-52

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.