Pseudomonas aeruginosa PA7, PSPA7_3386

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_3386
Name
Replicon chromosome
Genomic location 3505267 - 3505980 (- strand)

Cross-References

RefSeq YP_001348746.1
GI 152985537
Entrez 5356015
INSDC ABR82720.1
NCBI Locus Tag PSPA7_3386
UniParc UPI00015770B4
UniProtKB Acc A6V6R1
UniProtKB ID A6V6R1_PSEA7
UniRef100 UniRef100_A0A086BXW2
UniRef50 UniRef50_W0YR84
UniRef90 UniRef90_W0YR84

Product

Feature Type CDS
Coding Frame 1
Product Name
putative transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -3.59
Kyte-Doolittle Hydrophobicity Value -0.128
Molecular Weight (kDa) 27.3
Isoelectric Point (pI) 5.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3SZT TRANSCRIPTION 07/19/11 Quorum Sensing Control Repressor, QscR, Bound to N-3-oxo-dodecanoyl-L-Homoserine Lactone Pseudomonas aeruginosa 2.55 X-RAY DIFFRACTION 97.5
6CBQ transcription/agonist 02/05/18 Crystal structure of QscR bound to agonist S3 Pseudomonas aeruginosa 2.8 X-RAY DIFFRACTION 97.5
6CC0 TRANSCRIPTION 02/05/18 Crystal structure of QscR bound to C12-homoserine lactone Pseudomonas aeruginosa 2.5 X-RAY DIFFRACTION 97.5

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 175 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001096 (1439 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_3386

Human Homologs

References

No references are associated with this feature.