Strain | Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGCCACGTTGACCCGCGGGTGGCGCTCGCGAAAGGTCTTCAATACCAGCGGCAGCAGGTTGCCGGCGAAGGAGGGCATGGCGGCGATGGAGACCTTGCCC AGTTGCAGGGTGAAGTGCTGGCGCAGCAATTCCTCGGTGTTGTCCCAGTCGGCCAGCAGGCGCTGCGCCAACGGCAGCAGGGCCTCGCCCTCGGGGGTGA GGCTGACGCTGCGGGTGGTACGTTCCAGCAGCGCACCGCCGAGGCTTTCCTCCAGGCTCTTGATCGCCAGGCTCAGGGCCGGCTGGGAGAGGTGCAGGCG TTCGCCGGCCTGGGCGAAGCTGAGGCTCTGCGCCACGGCGAGGAAGGCGCGCAACTGCTTGACGGTCATTTATTTGTTTTTCTCATCAATGGATTGGAAA AACAAACTTAACAAATCAGTCCGCAGCGGAGAAGCTCTGTGCGACCCGGCAGTCGGACTGCCGCACGCACAATCACAAGAGCCGGAAGAGGCACAGCAGC
|
|
DNA Sequence for Gene |
>PSPA7_3295
ATGAGCGGACTCGACAAGCGAGTAGGCAGTTACGAAGAGGCCCTCGAAGGCCTGACCGACGGCATGACCGTCCTCGCCGGGGGCTTCGGCCTCTGCGGGA TCCCCGAGAACCTGATCGCGGAAATCCGCCGGCGCGGGGTCAGGGACCTCACGGTGGTCTCGAACAACTGCGGCGTCGATGGCTTCGGCCTCGGGGTGCT GCTGGAGGACCGGCAGATCCGCAAGATGATCGCGTCCTACGTCGGCGAGAACGCCCTATTCGAGCAGCAACTGCTCAGCGGCGAGCTGGAGGTCGAACTG ACCCCCCAGGGCTCGCTGGCCGAGAAGATCCGCGCCGGCGGCGCCGGCATCCCGGCCTTCTTCACCGCCACCGGCTACGGCACCCCGGTCGCCGAGGGCA AGGAGGCACGCGAGTTCAATGGCCGCCACTACATCCTCGAACCGGCCATCACCGGCGACTTCGCCATCGTCAAGGGCTGGAAGGCCGACCATTTCGGCAA CGTCGTCTATCGCCACACCGCGCAGAACTTCAACCCGCTGGTCGCCACCGCCGGGCGCATCACGGTGGTCGAGGTGGAGGAGATCGTCGAACCCGGCGAA CTGGACCCGACGCAGATCCACACCCCCGGCATCTACGTCGACCGGATCATCCAGGGTCGGTTCGAGAAACGCATCGAGAAACGCACGCTGCGCGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CGGCGGCCGCTACAACGACAAGAGGTTTCCCCAGATGGCACTTACCCGCGAACAGATGGCGCAGCGCGTGGCGCGCGAATTGAAGGACGGCTACTACGTC AACCTCGGCATCGGCATCCCGACCCTGGTGGCCAACTACGTGCCGGAGGGCATCGACGTGATGCTCCAGTCGGAGAACGGCCTGCTCGGCATGGGCGCGT TTCCCAGCGAGGCGGAAGTCGACGCGGACATGATCAACGCCGGCAAGCAGACCGTGACCGCCCGCGTCGGCGCGTCGATCTTCGACTCGGCGCAGTCCTT CGCCATGATCCGTGGCGGCCATGTCGATCTCACCGTGCTCGGCGCCTTCGAGGTGGACGTGCGCGGCAACATCGCTTCCTGGATGATCCCCGGCAAGCTG GTCAAGGGCATGGGCGGCGCCATGGACCTGGTGGCCGGCGCGGAGAACATCATCGTCACCATGACCCATGCCTCCAAGGACGGCGAGTCCAAGCTGCTGC
|
|
Amino Acid Sequence |
>putative CoA transferase, subunit A
MSGLDKRVGSYEEALEGLTDGMTVLAGGFGLCGIPENLIAEIRRRGVRDLTVVSNNCGVDGFGLGVLLEDRQIRKMIASYVGENALFEQQLLSGELEVEL TPQGSLAEKIRAGGAGIPAFFTATGYGTPVAEGKEAREFNGRHYILEPAITGDFAIVKGWKADHFGNVVYRHTAQNFNPLVATAGRITVVEVEEIVEPGE LDPTQIHTPGIYVDRIIQGRFEKRIEKRTLRA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|