Strain | Pseudomonas fluorescens strain AU10973 Scaffold_230, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATCGATGGAGGTCTGCTGCTGGTGTCGCAGTTCACCCTGGCAGCAGACACCAAGAGCGGGCTGCGGCCGAGCTTCTCCACAGCGGCCCCACCGGCCCTGG GAGCGGCGCTATTTGATCACTTGCTGTTACAAGCGCAACAATTGCATGGCAAGGTGTCGTCGGGGCGTTTTGGCGCCGATATGCAGGTGCATTTGGTCAA TGATGGCCCTGTGACCTTCCTCTTGCAGACGTGAATGTATTAAAAACGACTTTAATGCCTAAAAACGCAGGGTTTCGCTACAAATACTTCGTTATCCCTG GTGCGTTGTTTCGCGGGCTACTAGATAATCGCGCGCTACGGGGATCAGCGTTGTTTGGTCCATTTTTGACTTAGGTAGAGACTTGTCCGATAGCCATTGG GGAATCATTTTGACCCAGGGGAGTCGGAACAATGCTCGCCAACCTGGCATATAGATAGCTGGCCGTTGGTTTTTTGATCTGTTTTCGGCGAGGGTTGCTC
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DNA Sequence for Gene |
>MZ33_RS20720
GTGATTGTTAGTCCCTGTAATGCACCAAAATTGTCTGCCAAACGGTTACGAAACGCACTGGTGACGGGCTCGGCCCTGTTTTGCCTGTTCGGCGCGGGTC AACTGTGGGCATTCAGTCTGGATGATGTGTCGGCCAAGGCAAAAGAGCTGGCCGGGCAGAAATACGAAGCTCCGCGCAGCAATCTGCCGAACGAATTTCG CGAAATGAAATTCGCGGACTACCAGAAGATTCGTTTCCGCAACGAAAAAGCCGAGTGGGCCGATCAGAACACCCCGTTCAAGCTGTCCTTCTATCACCAG GGTATGCACTTCGATACACCGGTGAAAATCAACGAAGTCACCGCCGACAGCGTGCAGGAAATCAAGTACGACCCAACGCGCTTCGATTTCGGCGACGTGA AGTTTGATCCTAAAGCCACCGAACAGCTGGGTTATGCCGGCTTCCGTGTGCTATTCCCGATCAACAAGGCCGACAAGCAAGACGAAATCATGACCATGCT GGGCGCGAGCTACTTCCGCGTGGTCGGCAAGGGCCAGGCCTATGGCCTGTCGGCCCGTGGCATGGCGATCGACACCGCATTGCCGTCTGGTGAAGAATTC CCGCGTTTCACCGAGTTCTGGATCGAACGGCCGAAACCGGGTGAGAAACAACTGGTGATCTTTGCCCTGCTGGACTCGCCACGCGCGACCGGTGCTTACC GCCTGATCCTGCGTCCGGGTACCGACACCATTGTCGATGTCAAATCCCAGATGTTCCTGCGCGACAAGGTCAGCAAGCTGGGCGTTGCCCCGTTGACCAG CATGTACCTGTTCGGCGCGAACCAGCCGTCCAAGGTGCTCAACTACCGTCGTGAGCTTCACGATTCCAGTGGCCTGTCGATCCATGCCGGCAATGGCGAG TGGATCTGGCGCCCGCTGAACAACCCTAAACACCTGTCGGTCAGCAACTTCACCGTAGAGAACCCGCGTGGTTTCGGCCTGCTGCAACGTGGTCGCGACT TCAGCCACTACGAAGACCTGGACGACAACTACGACAAGCGCCCAAGCGCCTGGATCGAGCCTGAGGGCGACTGGGGCAAAGGCACCGTCAACCTGGTAGA AATCCCGACCGCCGATGAAACCAACGACAACATCGTTGCGTTCTGGAGCCCTGCGGAGCTGCCAGAAGTCGGCAAGCCACTGGATGTCGCCTACCGCCTG CACTGGACCATGGACGAGAAGTCGCTGCACCCGACCGACAGCGCCTGGGTCAAGCAGACCCTGCGTTCCACCGGTGACGTGAAGCAATCCAACCTGATTC GCCAGCCTGACGGCAGCGTGGCCTACCTGGTGGACTTCGAGGGCCCGTCCCTCAAGGCCCTGCCGACGGATGCCCCGGTTCGCAGCCAGGTCAGTGTCGG CGACAACGCCGAACTGGTTGAGAACAGCGTGCGCTACAACGAGCACACCAAAGGCTGGCGCCTGACCCTGCGCATGAAGATCAAGGACGCAGGCAAACCG ACCGAAATGCGCGCGGCGCTGGTGCAGGACGTTCCTCCGCCGGCCCCCGAGCAGGACTCGAGCCACGTGCTCAAGGCCGACAAGGTCCTGGCCAAGCAAC ACGAGAAACAGGCCAAGAAAGACGCGAAAGACAAGGAAGCCAAGCAGCCAGAAGCTGCCCCAGCCACACCGGAGCCGATCAAGACCGAGCAAGTCCTGAC CGAAACCTGGAGCTATCAGTTGCCTGCCGATGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTCTCAAGTAACGCCCGAGACTCTGTCCGAGTACCTGGCGCATCTACCGATGACCGCTGAGCAGCGCGCCGAACTGGCGGGCTGCACATCCTTCACCGAG TTGCACGAACGCTTGTCGTCGAAGACGTTCGATGCGCCTGGCGACGCCGCGCAGGCGTCGGTTGGCACTCGGTTGACCCTCAGCACCGCAGAAGAGCTGC AAGACGCTGAAATGCTGGCGCTCGACGCCGAGGGCCGCGTGTGCCTCAAGGCCACGCCGCCAATTCGTCGTACTCGCGTGGTACCGGAGCCATGGCGCAC CAATATCCTGGTGCGCGGCTGGCGTCGTATCACCGGGCGCAGCAACCCACCTGCACCGCCGAAGGATGAGCGCGTATTGCCGGCCGCCCGCTGGCGTACC GTCGGTTCGATCCGTCGTTACATCCTGCTGGTGCTGATGCTCGGCCAGACCATCGTTGCTGGCTGGTACATGAAAGGCATCATGCCGTACCAGGGCTGGT
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Amino Acid Sequence |
>glucan biosynthesis protein G
MIVSPCNAPKLSAKRLRNALVTGSALFCLFGAGQLWAFSLDDVSAKAKELAGQKYEAPRSNLPNEFREMKFADYQKIRFRNEKAEWADQNTPFKLSFYHQ GMHFDTPVKINEVTADSVQEIKYDPTRFDFGDVKFDPKATEQLGYAGFRVLFPINKADKQDEIMTMLGASYFRVVGKGQAYGLSARGMAIDTALPSGEEF PRFTEFWIERPKPGEKQLVIFALLDSPRATGAYRLILRPGTDTIVDVKSQMFLRDKVSKLGVAPLTSMYLFGANQPSKVLNYRRELHDSSGLSIHAGNGE WIWRPLNNPKHLSVSNFTVENPRGFGLLQRGRDFSHYEDLDDNYDKRPSAWIEPEGDWGKGTVNLVEIPTADETNDNIVAFWSPAELPEVGKPLDVAYRL HWTMDEKSLHPTDSAWVKQTLRSTGDVKQSNLIRQPDGSVAYLVDFEGPSLKALPTDAPVRSQVSVGDNAELVENSVRYNEHTKGWRLTLRMKIKDAGKP TEMRAALVQDVPPPAPEQDSSHVLKADKVLAKQHEKQAKKDAKDKEAKQPEAAPATPEPIKTEQVLTETWSYQLPADE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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