Pseudomonas fluorescens AU10973, MZ33_RS12820

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU10973 Scaffold_210, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCGACAGCACGCTTCTCGATCTTGATGGCGTGGGGCGCGCGCTGCGCAGTGCGTTATCGCGGTTGTCGACATCGGCCCGAGGCGCTGCCGCTGCCGTGG CTGGGCCCTCGGTGATCACGCGGATGATCGAGATGGAGGCCGGGCTGACTGACGATGAGATGGGCTGGATGATCCAGATGGAGGCAGACCAGTACATTCC CTATCCTCTGGATGACGTGGCCATCGACTTTCAAGTGCGCGGGCCGAGCGCACTGGACCCCGGCCGTATCGAGGTGCTGTTGGCGGCGTGCCTGAAGGAA CAGGTCGAAGCCAGGGAGACGGTTTTGGCCCTGGCCGGGTTGGTGCCGAGGGTGGTCGATGTCGAAGCGTTTGCATTGGCGCGCGCTTGCAGTCAGGATT TCGCCAGCTTCACGCCGAGCGATCGAGTCGATGGTGCACAATGGGCCGTGGATGCCCAAGGGATGGGAGTTGCTTGCGGGTTGGCCCTGAGGAGTTTCGC
DNA Sequence for Gene
>MZ33_RS12820
TTGAAGACACGAATCAACCTATTGCCTTGGCGCCAGGCGCTGGCAGAGCGGCGACGCAAGTATTTGCTGGCGGGTTTGCTCGCGTTCGCCTGCGCGGCGC TCGCAGCCGTGTGGCTGGCGGACCAGGTGATCGACCAGGCAATCGACCGGCAGGTGACTCGCAATGACCATCTGGGCAAGGAGATCAACGGCCTGGATTC ACGCATCAGGACCATCGATGACCTGCAGGAGCGAAGCCAGCAGTTGGCGCAGCGCATGAAGGTCGTGCAAGACCTGCATGACTCTCGCTCCTCCGGTGCC CAGTTGTTGGATCAGTTGGCGCGCGCCGTGCCAGACGGCGTGCACCTGCATGAAGTGGTGGCGAAGGGTGACACGGTGAGTATCAGCGGCAGCGCAGAGT CCAGCCAGGATATCGCCCAGTTGATGCGCCGCCTCGAGGCGGCGGAAGGTGCCCATTCCACTCGACTGCAACATGTGCGCACAGATGGCGCGCGCGGCAA CAACGAATTCCAGCTGATGGTGCGTCAGGGAGAGTCCTCCGAGGCTCAACCTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTGCCAAGGCTCGATCTTTCTGCACTCACTCACAACGCTGCAAAATGGCCCCTACCAGGCAAGGCCCTGTTGGGCTGCGCGTTGGCGGGCGCAGTGTT TGTGGTGGGCGACTTCATTTACCTGAGCCCGTCGCGGCAACGGTTGCACGGGGTCGAGGCGCAGGAAGTGGTCCTGCAGCAGCAAGTCGTCCAAAAGACT TCCCTGGTTGCCAGCCTTGAGGTGCGTGCGCAGCCACTCCAGCTCATGCAGGCCAAGGCCGATGCACTGTTGCAGGCATTGCCGGGTGCGTCCGAGATGC CTGGCTTGCTGGACGACCTCGCGCGCTTGGCACTGGCCAATGGCTTATGGGTAGAAAGCGTCACCCCGCTGGATGAGCAGGCTCGACCGTTCTATCACGA GCAGCCTGTGCAGCTCGGCTTGACGGGGGCTTACCACGACCTGGCAACGTTCCTGAGCGGCCTGGCCGGGCTCGCGCGCATCGCCACGGTGCACGACGTT
Amino Acid Sequence
>fimbriae biosynthesis protein
MKTRINLLPWRQALAERRRKYLLAGLLAFACAALAAVWLADQVIDQAIDRQVTRNDHLGKEINGLDSRIRTIDDLQERSQQLAQRMKVVQDLHDSRSSGA QLLDQLARAVPDGVHLHEVVAKGDTVSISGSAESSQDIAQLMRRLEAAEGAHSTRLQHVRTDGARGNNEFQLMVRQGESSEAQP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site