Pseudomonas fluorescens AU10973, MZ33_RS11255
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU10973 Scaffold_210, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCGATGGCGGAGTATCATGCAGCGCTGTGTATGTGACACACCGCCATCGCAGGCAAGCCAGCTCCCACATTTGATTGGCGGTGTTGCTTAGTCTTCCT TGCGTACGGTGGCGACGTCGTCGGCCTTGACCCGTACACGCTTGCCGGCGATGTCGGTGAATTCATAGAAACCGTCGGCGGTCTTGGTTTTTGGGGTGTC CTTGGTCAAATATTGTGTGCCGTTTTGCAGTGTCACTACGGTTTGCGTCGTGCAACCGGCCACTACCAGAAAAGTGAGTACAACCAGTGGCAGACCCAAA TTCTTCATGTTCATAACCCTTACCTTAACCTTGAAAAGTCCCACGCCAGACGCCGTGGGCGACAAATGTTACGCCATCGACTTCCCCATCTGATCACTTT TATGCAAAAAGTTGCAGGCGCCATTTATCTGTTACCGATTGCAACCTGGCATTTGCGACGGCACTCTGTATGCATAACCAGTATTTGATCGCTGCGCGCC
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| DNA Sequence for Gene |
>MZ33_RS11255
ATGGCCAATCCCCTCGAAGAACCGCTCTATTACCTGCATAACTTCCGCCAGGTCCTGCAATGGCTGGGGCAACGCTATGCGGATCTGCTCGACGCGGACG AACAGCATTTCATTCAGCAATTTGACAGGTTGCCGCAAGCGTCCCAGGCGCTATTGGTGCGCATGGTGATGCGCAAGGGCGTGCATTTTCGCGCGGGCAA GCTCAATTACGGCGAGATAGGTTGCACCCACGCGGCGGTCGGGCCATTGCTTGCACTGGGATGGGTTGAGGACGAATGCCTGCTGGCTTTTGAAGAACTG TTCGCCTTGCTGCAAAAAGGCGAAATCCTCGCTGCGTTCAAGCCTTGGATCGACCAGCCCAAAGGCAAGAAAGCCGACTGGCTGGAAGGGTTGTCGGCGC ACTTTACCGACAGCCGCTGCTTTGCCAACTGGTGCCCCGACCTTGCCGACACGTTGTACAGCCTCACGGTGATGGCGCTGTGTGATCGCCTGCGCCTGAT GTTCTTTGGCAACCTGCATCAGGACTGGTCCGAGTTCGTCCTGGCTGACCTGGGCATCTACACCTATGAAAAAGTCGAGTTCTGCGCCGAATCCCGTGGC CTGCGCAGCCGTGACGACGTGCATGGGTTTTTGTTCCTGCACCAGTGCCAGCAGGCCTTTGAAGCCGGTGATGCGCTGGAGGAAGTACTGGCACAGGTCG CAACGTTGGAAACGGATAACCCCTGGTTGGAAAAGCGCCGCGCCAAGCTGTTATTCCAGGTGGGTCAATATTGCGAGCGCACGGCCGAATTGGCACTGGC GCAACGCATTTATCGCACCTGCGCCTATCCCGGTGCTCGCTCGCGGTTGATCCGTGTGCTGGAGCGCCAGGAGGACTACGTACACGCCATGGCCCTGGCG AAGATCGCCCAGCAGGCCCCGGAGAGCGCCGCCGAACAGCAGCACTTGCTGCGTGTGGTGCCACGCCTGCGACGCAAACTCGGGGAGCCGGCATTGCCCA AGGTCAAGCCACGGCCCGTCACGCGCCTGGACCTGGCCCTCGCGTTACCGGAGCCGTCGATGTCGGTGGAGTATTGCGTGCAGGCACATCTGAGCGAGCC CGATGGGCCGGTGCACTACGTTGAGAACGGCTTGATCAACTCGTTGTTCGGCCTGCTGTGCTGGGACGTGATCTTCGCGCCGCTGCCAGGTTCGTTTTTC CACCCGTTCCAGCGCGGGCCTGCTGATTTGCACAGCGAAGACTTCCACCTGCGCCGCGCACCGCTGTTCGCCGCGTGCTTCGAGCAACTGCAGGACGAGC GCTACAAGACCACCATTCGCCAACGCTATGCCGAAAAGTGGGGCATCCAGTCGCCCTTCGTGTTCTGGCACCTGCTCAGCGAAGAGCTGCTGGAACAGGC CCTGGCCTGCCTGCCCGCTGAACACCTGCGCTACTGGTTCGAGCGGCTGCTGCTGGACATCCGCGCCAACCGTGCCGGCATGCCGGACCTGATCCAGTTC TGGCCCGCGCAAAAGACGTACCGCATGATCGAGGTCAAGGGCCCCGGCGACCGGCTTCAGGACAACCAGTTGCGCTGGCTGGAGTTCTGCGGCGAATACC AGATGCCGGTGACGGTCTGCTATGTGCGCTGGGCAGCGTCCGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTACAGCGTTGCCGTGCGTGCACTGTGTGAGTTCACGGCCAAGGTCGGTGACCTGGACCTGCGCTTCACGCCGTCGCCCAGCGCCCAGGAAGGCATTGT CGGCCACCGCACCGTCGCCTCGCGGCGCAGCCAGCACTACCAGAATGAAGTGGCACTCGAAGGTGAGTACCAGCAACTCAAGGTGCGGGGCAGGGCAGAC GGCTACGACCCGGACGCCAACCGCCTGGAAGAAGTGAAAACCTATCGCGGCGACCTGGATGCGCAGCCCACCAACCACCGGCAATTGCATTGGGCCCAGG TCAAAGTCTATGGCTGGTTGATGTGCCAGAAGCTTGGCCTGCCTGAGATCGACCTGGCGCTGGTGTACTTCGATATCGTCGGCGAAGGCGAAACGGTGCT CAACCAACGCTTTCAAGCCACCGAGCTGGAACCGTTCTTCAACCAGCAATGCGCACTGTTCCTCGGTTGGGCCCAACAGGAAATGGCGCACCGTGAAGCG
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| Amino Acid Sequence |
>nuclease
MANPLEEPLYYLHNFRQVLQWLGQRYADLLDADEQHFIQQFDRLPQASQALLVRMVMRKGVHFRAGKLNYGEIGCTHAAVGPLLALGWVEDECLLAFEEL FALLQKGEILAAFKPWIDQPKGKKADWLEGLSAHFTDSRCFANWCPDLADTLYSLTVMALCDRLRLMFFGNLHQDWSEFVLADLGIYTYEKVEFCAESRG LRSRDDVHGFLFLHQCQQAFEAGDALEEVLAQVATLETDNPWLEKRRAKLLFQVGQYCERTAELALAQRIYRTCAYPGARSRLIRVLERQEDYVHAMALA KIAQQAPESAAEQQHLLRVVPRLRRKLGEPALPKVKPRPVTRLDLALALPEPSMSVEYCVQAHLSEPDGPVHYVENGLINSLFGLLCWDVIFAPLPGSFF HPFQRGPADLHSEDFHLRRAPLFAACFEQLQDERYKTTIRQRYAEKWGIQSPFVFWHLLSEELLEQALACLPAEHLRYWFERLLLDIRANRAGMPDLIQF WPAQKTYRMIEVKGPGDRLQDNQLRWLEFCGEYQMPVTVCYVRWAASA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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