Strain | Pseudomonas fluorescens strain AU10973 Scaffold_200, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGGCGTTCTACGGCATGTCGACCTTCGAAGGGCCGATGATGGCCATCAAGACTGTCAACTCGCTGTCCCACTACACCGACTGGACCATCGGCCACGTAC ACGCCGGCGCCCTCGGTTGGGTGGCGATGATATCCATCGGCGCGCTGTACCACATGATCCCCAAACTGTTCGGCCGAGCGCAGATGCACAGCGTCGGGCT GATCAACACCCACTTCTGGCTGGCAACCATCGGTACCGTGCTCTATATCGCCTCGATGTGGGTCAACGGCATCACCCAGGGCCTGATGTGGCGTGCGATC AACGATGACGGCACCCTCACCTACTCCTTCGTCGAAGCGCTGCAAGCCAGCCACCCGGGCTACATCGTCCGCGCCCTGGGCGGTGCGTTCTTTGCCGCCG GCATGCTGTTCATGGCCTACAACGTCTGGCGCACCGTGCGTGCTTCCGACCCTGCAGAAGCCGAAGCCGCCGCCAAGATCGCCGTTGTGGGAGCCCACTG
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DNA Sequence for Gene |
>MZ33_RS19015
ATGAAGCATGAAGTAGTCGAGAAGAATATCGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGTATCGGCGGCCTGACCCAGATCGTTCCGCTGTTTT TCCAGGACGTGACCAACAAGCCGGTGGAGGGCATGAAGCCGCGCACCGCCCTTGAACTGGAAGGCCGCGACGTCTACATCGCCAACGGTTGTGTCGGCTG CCACTCGCAGATGATCCGTCCGTTCCGTGCAGAAACCGAACGCTACGGCCATTATTCGGTCGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGC TCCAAGCGGACCGGCCCGGACCTGGCCCGTGTCGGCGGGCGTTACTCCGATGACTGGCAACGTGCGCACTTGTACAACCCGCGCAACGTCGTGCCCGAGT CGAAGATGCCGGCGTACCCGTTCCTCGTGGAAAACAAGCTCGACGGCAAGGACACCGCGAAGAAGATGGAAGTCTTGCGCACCCTGGGCGTGCCCTACAC CGACGAAGACATCGCCGGTGCAGCCGCCGCCGTGAAGGGCAAGACCGAAATGGACGCATTGGTGGCCTACCTGCAAGGCCTGGGCACCCTCATCAAAAGC AAACGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCTACATGGATATCGGGATGATTCGAGGCCTGGGCACCGTTGTGGTGATGGTGGCCTTTATCGGCCTGGCGTTGTGGGTGTTCAGCCCCAAGCGCAAGTC GGAGTTTGACGACGCGACCATGCTGCCCTTTGCGGATGATCCCGAAGCCATCAAGCACGTCGAGCAAGCTTCTAGGAGTAACAAAGAATGACTACGTTCT GGAGTCTGTACGTCACAGTCCTCAGTCTGGGTACCATCTTCGCCCTGACCTGGCTGCTGCTGTCCACCCGCAAGGGCCAGCGCGCCGAGCAAACCGACGA AACCGTCGGCCACTCCTTCGACGGCATCGAGGAGTACGACAACCCGCTGCCCAAGTGGTGGTTCATGCTGTTCGTCGGCACCATCATCTTCGCCCTCGGC TACCTGGCGCTGTACCCTGGCCTGGGCAACTGGAAAGGCCTGCTGCCGGGCTACGGCTACCTCGACAACGACAAGCAAACCCCCTTCGCCAATGGCCAGA
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Amino Acid Sequence |
>cbb3-type cytochrome c oxidase subunit II
MKHEVVEKNIGLLAFFMVIAVSIGGLTQIVPLFFQDVTNKPVEGMKPRTALELEGRDVYIANGCVGCHSQMIRPFRAETERYGHYSVAGESVWDHPFLWG SKRTGPDLARVGGRYSDDWQRAHLYNPRNVVPESKMPAYPFLVENKLDGKDTAKKMEVLRTLGVPYTDEDIAGAAAAVKGKTEMDALVAYLQGLGTLIKS KR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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