Pseudomonas aeruginosa PA7, PSPA7_2744 (mexF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GGCTGGACTTCCTCGACAACCAGGTCAACCCGCGCACCGGCACCATCCGCGGCCGCGCCGTGTTCGACAACGCCAAGGGCGAGTTCACCCCGGGGCTCTA CGTGCGCCTGAAGCTGGTCGGCAGCAAGACCTACGCCGCCACCCTGATCAAGGACGAAGCGGTCGGCACCGACCTGGGCAAGAAGTTCGTGCTGGTCCTG GACGGCGACAACAAGACCGTCTACCGCACCGTCGAGATGGGGCCGAAGCTGGAGGGCCTGCGCATCGTCCGCAGCGGCCTGAGCAAGGGCGACCGGATCG TCGTCAACGGCCTGCAGCGGGTCCGTCCGGGCATGCAGGTGGACCCGCAGAAGGTCGAGATGGCCAGCACCGACACCCTGGCCACCCTCGCGCGCCTGCG GCAGTCGGTCGGCGACAGCGAACCGCCGAAGGTGGCGGCGACCAAGGACAACGCCACTCGCAACGAGCCGCGCGGCTGAGCGCGGCGATAGGAAGAACCG
DNA Sequence for Gene
>PSPA7_2744 |mexF
ATGAATTTCTCCCAATTCTTCATCCAGCGGCCGATCTTCGCCGCGGTGCTGTCGCTGCTGATCCTGATCGGCGGCGCCATCTCCCTGTTCCAGCTACCCA TCAGCGAGTACCCGGAAGTGGTGCCGCCGACCGTCGTGGTCCGCGCCAACTTCCCCGGTGCCAACCCGAAAGTCATCGGCGAAACCGTCGCCTCTCCCCT GGAGCAGGCGATCACCGGGGTGGAGAACATGCTCTACATGTCCTCCCAGTCGACCTCCGACGGCAAGCTGACCCTGACCATCACCTTCGCCCTCGGCACC GACCTGGACAACGCCCAGGTACAGGTGCAGAACCGCGTCACCCGGACCGAGCCGAAGCTGCCGGAAGAAGTGACCCGGCTCGGCATCACCGTCGACAAGG CCTCGCCCGACCTGACCATGGTCGTGCACCTGACCTCGCCGGATAACCGCTACGACATGCTCTACCTGTCGAACTACGCGGTGCTCAACGTGAAGGACGA ACTGGCCCGCCTCGACGGCGTCGGCGACGTCCAGCTGTTCGGCCTCGGCGACTATTCCCTGCGCGTCTGGCTGGACCCGAACAAGGTCGCCTCGCGCAAC CTCACCGCCACCGACGTGGTCAACGCCATCCGCGAGCAGAACCGCCAGGTCGCCGCCGGCACCCTGGGCGCACCGCCGGCGCCGAGCGCCACCAGCTTCC AGCTGTCGATCAACACCCAGGGCCGCCTGGTCAACGAGGAAGAGTTCGAGAACATCATCATCCGCACCGGCGCCAACGGCGAGATCACCCGCCTGCGCGA CATCGCCCGGGTCGAGCTGGGCTCCAGCCAGTACGCCCTGCGCTCGCTGCTGAACAACAAGCCGGCGGTGGCGATCCCGATCTTCCAGCGTCCCGGCTCG AACGCCATCGAGATCTCCAACCTGGTGCGGGAGAAAATGGCCGAGCTGAAGCAGAGCTTCCCGCAGGGCATGGACTACTCCATCGTCTACGACCCGACCA TTTTCGTCCGCGGCTCCATCGAGGCGGTGGTGCACACCCTGTTCGAAGCCCTGGTGCTGGTGGTGCTGGTGGTGATCCTGTTCCTGCAGACCTGGCGCGC CTCGATCATCCCCCTGGCCGCGGTGCCGGTGTCGCTGATCGGCACCTTCGCGGTGATGCACATGCTCGGCTTCTCGCTCAACGCGCTGTCGCTGTTCGGC CTGGTGCTGGCGATCGGCATCGTGGTCGACGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCAATATCGGCCTCGGCCTCAAGCCGGTGGAAGCCACCA AGCGCGCCATGCGCGAGGTGACCGGGCCGATCATCGCCACGGCGCTGGTGCTCTGCGCGGTGTTCATCCCGACCGCGTTCATCTCCGGCCTCACCGGGCA GTTCTACCGCCAGTTCGCCCTGACCATCGCGATCTCCACGGTGATCTCGGCGTTCAACTCGCTGACCCTGTCGCCGGCGCTGGCGGCGGTCCTGCTCAAG GGCCACCACGAGCCGAAGGACCGCTTCTCGGTATTCCTCGACAAGCTCCTCGGCGGCTGGCTGTTCCGTCCGTTCAACCGCTTCTTCGACCGCGCCAGCC ATGGCTACGTCGGCACGGTGAACCGGGTCCTGCGCGGCAGCTCGATCGCCCTGCTGGTCTACGGCGGGCTGATGGTGCTGACCTACTTCGGCTTCTCCAG CACGCCGACCGGTTTCGTCCCGCAGCAGGACAAGCAGTACCTTGTGGCCTTCGCCCAGTTGCCCGACGCGGCCAGCCTGGACCGTACCGAGGCGGTGATC AAGCAGATGTCCGAGATCGCCCTGGCGCAGCCCGGCGTGGCCGACTCGGTGGCCTTCCCCGGCCTGTCGATCAACGGCTTCACCAACAGCCCGAACAGCG GCATCGTGTTCACCCCGCTGAAGCCGTTCGACGAGCGCAAGGACCCGAGCCAGTCGGCCGGCGCCATCGCCGCCGCGCTGAACGCCAAGTACGCCGACAT CCAGGACGCCTACATCGCGATCTTCCCGCCGCCGCCGGTACAGGGGCTGGGGACCATCGGCGGCTTCCGCCTGCAGATCGAGGACCGTGGCAACCAGGGC TACGAGGAGCTGTTCAAGCAGACCCAGAACATCATCGCCAAGGCCCGTGCGCTGCCTGAGCTGGAACCCAGCTCGGTGTTCTCCAGCTACCAGGTCAACG TGCCGCAGATCGACGCCGACATCGACCGCGAGAAGGCCAAGACCCACGGCGTGGCGATCAGCGACATCTTCGACACCCTGCAGGTCTACCTCGGCTCGCT GTACGCCAACGACTTCAACCGCTTCGGCCGTACCTACCAGGTCAATGTCCAGGCCGAGCAGCAGTTCCGCCTCGAACCCGAGCAGATCGGCCAGCTGAAG GTGCGCAACAACCTTGGCGAGATGGTCCCGCTGGCGTCCTTCATCAAGGTCAGCGACACCTCCGGCCCGGACCGCGTGATGCACTACAACGGCTTCATCA CCGCCGAACTGAACGGCGCCCCGGCCGCCGGCTACAGCTCCGGCCAGGCGCAGGCGGCGATCGAGAAGCTGCTGAAGGAGGAACTGCCCAACGGCATGAC CTACGAGTGGACCGAGCTGACCTACCAGCAGATCCTCGCCGGCAACACCGCGCTGTTCGTCTTCCCGCTCTGCGTGCTGCTGGCCTTCCTCGTGCTGGCC GCCCAGTACGAGAGCTGGAGCCTGCCGCTGGCGGTGATCCTGATCGTGCCGATGACCCTGCTGTCGGCGATCACCGGGGTGATCCTGGCCGGCAGCGACA ACAACATCTTTACCCAGATCGGCCTGATCGTTCTGGTGGGGCTGGCGTGCAAGAACGCGATCCTGATCGTCGAGTTCGCCAAGGACAAGCAGGAGGAAGG CATGGACCGCGTCGCCGCGGTGCTGGAAGCCTGCCGCCTGCGCCTGCGGCCGATCCTGATGACGTCCATCGCCTTCATCATGGGCGTGGTGCCCCTGGTG ATCTCCACCGGCGCCGGCGCCGAGATGCGTCACGCGATGGGCGTGGCGGTGTTCTCCGGGATGATCGGGGTGACCTTCTTCGGCCTGCTGCTGACGCCGG TGTTCTACGTCCTCATCCGCCGCTTCGTGGAAAACCGCGAAGCGCGCCGCGCCGCCAACGACAAAGGCCTGCCAGAGGTGCATGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCACGCGCAGTCGATCCGGAGCGGGCTGGCGCCCACCCTGGGTCTGTTCAGTCTGCTGGCGCTCAGCGCCTGCACGGTGGGTCCGGACTACCGGACCCC CGACACCGCGGCGGCGAAGATCGACGCCACGGCGAGCGAGCCCTACGACCGCAGCCGCTTCGAAAGCCTGTGGTGGAAACAGTTCGACGATCCGACTCTG AACCAGTTGGTCGAGCAGTCGCTGACCGGCAACCGCGACCTGCGCGTGGCCTTCGCCCGCCTGCGCGCCGCCCGCGCCCTGCGCGACGACGTGGCCAACG ATCGCTTCCCGGTGGTCACCAGCCGCGCCAGCGCCGACATCGGCAAGGGCCAGCAACCGGGAGTGACCGAGGACCGGGTCAACAGCGAACGCTACGACCT GGGCCTGGACACGGCCTGGGAGCTCGACCTGTTCGGGCGTATCCGCCGCCAGCTGGAATCCAGCGACGCCCTCAGCGAAGCGGCCGAGGCCGACCTGCAG
Amino Acid Sequence
>RND multidrug efflux transporter MexF
MNFSQFFIQRPIFAAVLSLLILIGGAISLFQLPISEYPEVVPPTVVVRANFPGANPKVIGETVASPLEQAITGVENMLYMSSQSTSDGKLTLTITFALGT DLDNAQVQVQNRVTRTEPKLPEEVTRLGITVDKASPDLTMVVHLTSPDNRYDMLYLSNYAVLNVKDELARLDGVGDVQLFGLGDYSLRVWLDPNKVASRN LTATDVVNAIREQNRQVAAGTLGAPPAPSATSFQLSINTQGRLVNEEEFENIIIRTGANGEITRLRDIARVELGSSQYALRSLLNNKPAVAIPIFQRPGS NAIEISNLVREKMAELKQSFPQGMDYSIVYDPTIFVRGSIEAVVHTLFEALVLVVLVVILFLQTWRASIIPLAAVPVSLIGTFAVMHMLGFSLNALSLFG LVLAIGIVVDDAIVVVENVERNIGLGLKPVEATKRAMREVTGPIIATALVLCAVFIPTAFISGLTGQFYRQFALTIAISTVISAFNSLTLSPALAAVLLK GHHEPKDRFSVFLDKLLGGWLFRPFNRFFDRASHGYVGTVNRVLRGSSIALLVYGGLMVLTYFGFSSTPTGFVPQQDKQYLVAFAQLPDAASLDRTEAVI KQMSEIALAQPGVADSVAFPGLSINGFTNSPNSGIVFTPLKPFDERKDPSQSAGAIAAALNAKYADIQDAYIAIFPPPPVQGLGTIGGFRLQIEDRGNQG YEELFKQTQNIIAKARALPELEPSSVFSSYQVNVPQIDADIDREKAKTHGVAISDIFDTLQVYLGSLYANDFNRFGRTYQVNVQAEQQFRLEPEQIGQLK VRNNLGEMVPLASFIKVSDTSGPDRVMHYNGFITAELNGAPAAGYSSGQAQAAIEKLLKEELPNGMTYEWTELTYQQILAGNTALFVFPLCVLLAFLVLA AQYESWSLPLAVILIVPMTLLSAITGVILAGSDNNIFTQIGLIVLVGLACKNAILIVEFAKDKQEEGMDRVAAVLEACRLRLRPILMTSIAFIMGVVPLV ISTGAGAEMRHAMGVAVFSGMIGVTFFGLLLTPVFYVLIRRFVENREARRAANDKGLPEVHA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site