Pseudomonas fluorescens AU10973, MZ33_RS02550
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU10973 Scaffold_140, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCCCGAGGGTATGCATCCGCCGAGCAGGCAATCCTCGCCCAGGGGGCGCAGATCCACAGGTTCTGCCAGCCGTCCTCCTGAACGTCCAGGGTTTGGGTC AAGGGCGACGAGTTTTTACTGACGACCAGAAAGGCATGGGTGGCCGGGCTCGATGTGTTGCGCCAGAGCCTTCGGTGCGGTCATTGCGGCGTTGGCGGGG ACATGACGCTACACCCTCGCTGTGCAATACTCGCTGCCCTGCTAAATGCGTCAAGGCAGGCAATGCTTCCTTGTAAAAGGCGTATTTACCCCGACTTATC GCTGAATTTAGTCTGTTTTAGAGTGAAAGACCCTAGTGCCAGCTTTTTATACTGCACCCCCGCCGATCCCGCAGGCTGTGCCCTGTCGGACGTACCTGTC CACGAAACAGGCCCGGTTGAAGTTCGCCCCCGGCTTACCCGCCAGGCGCGCGGAACGCTCGGTGGCTCATATCCAATAACAAGACGAGGTTTGTACCCCT
|
|
| DNA Sequence for Gene |
>MZ33_RS02550
ATGCCAGTTGGCAATCACCTGCCCCATGGCGAGACCGCTCAGGGCGGCCCGCTGAAACGTGAACTGGGCGAACGGCATATTCGCCTGATGGCCCTTGGCG CCTGTATCGGCGTCGGCCTGTTCCTTGGCTCGGCCAAGGCCATTGAAATGGCCGGCCCGGCGATTATGCTTTCCTACATCATTGGCGGCCTGGCGATCCT GGTGATCATGCGCGCGCTGGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTACGCGCAGGACTACCTTGGCCCGTTGGCGGGCTTC CTCACCGGCTGGAACTACTGGTTCCTGTGGCTGGTGACCTGCGTCGCGGAAATCACCGCCGTCGCGGTGTACATGGGCGTCTGGTTCCCCGATGTGCCGC GCTGGATCTGGGCCCTGGCGGCCCTGGTGAGCATGGGCACGATCAACCTGATCGCGGTCAAGGCCTTCGGTGAGTTCGAATTCTGGTTCGCGCTGATCAA GATCGTCACCATCATCGCCATGGTGATCGGCGGTGTCGGCATCATCGCGTTCGGCTTTGGCAATGACGGCGTCGCGCTGGGTATTTCCAACCTGTGGGCG CACGGCGGCTTCCTGCCCAACGGCGTGCAGGGCGTGCTGATGTCCCTGCAGATGGTGATGTTCGCCTACCTGGGCGTGGAAATGATCGGCCTCACTGCCG GTGAAGCGAAGAACCCGCAGAAGACCATTCCGAATGCCATTGGCTCGGTGTTCTGGCGCATCCTGCTGTTCTACGTCGGTGCGTTGTTCGTGATTCTGTC GATCTACCCGTGGAACGAAATCGGCACCCAGGGCAGCCCGTTCGTGATGACCTTCGAGCGCCTGGGCATCAAGACTGCCGCAGGCATCATCAACTTCGTG GTGATCACTGCCGCGCTGTCGTCGTGCAACGGTGGCATCTTCAGCACCGGGCGCATGCTCTACAGCCTGGCGCAAAACGGCCAGGCGCCGGCAGCCTTCG GCACCACCTCGCGTAACGGCGTGCCGCGCAAGGCGCTGCTGTTGTCGATTTTTGCGTTGCTGCTGGGCGTGTTGCTCAACTACCTGGTGCCGGAAAAAGT CTTTGTCTGGGTGACCTCGATTGCCACCTTCGGCGCAATCTGGACCTGGGTGATGATCTTGCTGGCACAGCTCAAGTTTCGCCAGGGCCTGAGCCCGGCC GAACGTGCCGGCCTCAAGTACCGCATGTGGCTGTACCCGGTCAGTTCGTACCTGGCCTTGGCGTTCCTGGTGCTGGTGGTGGGCCTGATGGCGTACTTCC CGGATACCCGTATCGCGCTGTACGTAGGCCCGGTATTCCTGGTGCTGCTGACGGTACTGTTCTACGTGTTCAAGTTGCAGCCGACTGATGCCGGGCAACG GGCCCCCCACTCGGTTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGGCCAACACCCTGGAGCTTGCGGTTTCAGCAGGCTCCAGGGTGCCGACTCAGGCGTGTTGCAAGGCGGCCTGTGTGGCGACGGTCAGCTGTCGCACCAG ATGGTCATGTTCATCCTTCTCCCAATCGACCAATGACTGGCGCCGCTCCAGATACTCGTCGGAGGTTTTGTTGGGCAGCTCTCTTTCCAGCAACCTCACT TTGTATTGAGTACGGTCCTTGATGGTGGAAAAGGGCTCCGGGTGACTCCTTGCCAGGTACTCGATCCAGAACGCTTCCGTCAACAGCCATTCTTGCAAGG CCGGGCTTTGACCCAGCCGACGCAGTTGGGCGCGGGCATCATCGAGTACCGCGTCGGTCACGTAGCGCTCGACGGTATACAGCAACTCCAGCGGGTAGAA CGGCAGATCGAACTCCGCGGCCATTTGGGCGCGAAAGTAAATGCAGACCTCGGCCGGATCGACCTCCAGGTTGGCCAGTTCCCGTTGCCGGATGAAGTTG
|
|
| Amino Acid Sequence |
>D-alanine/D-serine/glycine permease
MPVGNHLPHGETAQGGPLKRELGERHIRLMALGACIGVGLFLGSAKAIEMAGPAIMLSYIIGGLAILVIMRALGEMAVHNPVAGSFSRYAQDYLGPLAGF LTGWNYWFLWLVTCVAEITAVAVYMGVWFPDVPRWIWALAALVSMGTINLIAVKAFGEFEFWFALIKIVTIIAMVIGGVGIIAFGFGNDGVALGISNLWA HGGFLPNGVQGVLMSLQMVMFAYLGVEMIGLTAGEAKNPQKTIPNAIGSVFWRILLFYVGALFVILSIYPWNEIGTQGSPFVMTFERLGIKTAAGIINFV VITAALSSCNGGIFSTGRMLYSLAQNGQAPAAFGTTSRNGVPRKALLLSIFALLLGVLLNYLVPEKVFVWVTSIATFGAIWTWVMILLAQLKFRQGLSPA ERAGLKYRMWLYPVSSYLALAFLVLVVGLMAYFPDTRIALYVGPVFLVLLTVLFYVFKLQPTDAGQRAPHSV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|