Strain | Pseudomonas fluorescens strain AU10973 Contig_41, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGGTTGTTCCGCCGCAACCGCGACGATCAATACTCGGCATGACACGAGTGGTCGGCCTGGGGTGCCAGCAAGGGTGTGATCTTCACGCCCTGCTGGCCTT GTTTGATAGCGCCCTCGCCGAGGGCGGTATCGAGCGCGACAGCATCACCGCGCTGGCCACTATCGACCGCAAACAGAATGAACCAGGCCTCCTGGCACTG GCCAAAGCGCTGGAACTGCCGTTGCAGTGCTTCAGCGCCGAGCAGTTGGCGGTTTTTGAACTCCGCCTGAGCCACAAGTCGGATGTTGTGTTTGCCCATA CCGGCTGTTATGGCATCGCCGAAAGCGCCGCCCTGGCCTTGGCGGAACAGCTCGGCAACGCCCCTGCCCGCTTGCTGATCACCCGCAAAAAGACTGCCCA GGCCACCTTTGCATTGGCATGCGCCGGGTAAAAATCTGATAATCGCCTCTTCCGATCATGAGCATCCTTCATGCTCGCCCGTTTTCCATCAGGATTTTCC
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DNA Sequence for Gene |
>MZ33_RS09205
ATGACCGTCTACTTCATCGGCGCAGGCCCCGGCGACCCGGAATTGATCACCGTCAAAGGCCAGCGGCTAATCCGCAGTTGCCCGGTGATCATCTATGCCG GCTCGTTGGTGCCTGCGGCGGTGCTGGAAGGCCATCAAGCGGAGAACGTGGTCAACAGCGCCGAACTGCACTTGGAACAAATCATCGACCTGATCAAGGC TGCCCATGCAAATGGCCAGGATGTGGCCCGCGTACACTCCGGTGACCCAAGCCTGTATGGCGCGATTGGCGAACAGATCCGCCATTTGCGCGAGCTGGGC ATCCCGTTCCAGATCATCCCCGGCGTCACCGCAGTCGCCGCTTGCGCTGCGCTGCTGGAAGCGGAACTGACCCTGCCCGACATCGCCCAAAGTGTGATCC TGACGCGCTACGCCGACAAAACCAGCATGCCAGCCGGTGAAGACTTCGACAGCCTGGCACGGCATGGCACGACCATGGCGATTCACCTGGGGGTCAACCA CCTGGACAAGATCGTCGCCGAATTGCTGCCGCACTATGGCGCGGATTGCCCGATTGCCGTGGTGCACCGGGCGACCTGGCCGGATCAGGACTGGGTGGTG GGCACGCTCAGTGATATTGCCGACAAGGTCACCGCGAAAGGGTTTCGGCGCACCGCGCTGATCGTGGTGGGCCGGGTATTGGCGAGTGACAGTTTCAGTG AGTCTTCGCTGTACCGGGCCGGGCATGCACACCTTTATCGGCCGTCATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACAACCTCACAAAGAACGCATAACATCCTGATTTATATTGGATAAAGCTCACTAAACGGACTGACTTTCCGGTGATATTTGCATCGTGTGATCAGTTCGG CAGCCGGCACACTGCAATCGCTGAACAGCCAACGCCTACAGTTAACGCTAAACGTCAGATAAATAGCGCAAGCCACTGAATTATAAGCATAAAAAAAACG ACGCTCACGGGGCGCCGTTTTTTCTGATCGCAGTGAACGCCTTACTCAGTAGTAGGCGTTTTCTTTCTGCGTGTGGTCGGTCACGTCACGTACGCCCTTG AGCTCCGGGATACGCTCGAGCAGGGTGCGCTCAATGCCTTCACGCAGGGTCACGTCCGCCTGGCCGCAGCCTTGGCAGCCACCGCCGAACTTGAGCACCG CGATGCCGTCCTCGACCACGTCGATCAGGCTGACCTGGCCACCGTGGCTGGCGAGCCCAGGGTTGATCTCGGTTTGCAGGTAATAGTTGATGCGCTCGTT
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Amino Acid Sequence |
>precorrin-4 C11-methyltransferase
MTVYFIGAGPGDPELITVKGQRLIRSCPVIIYAGSLVPAAVLEGHQAENVVNSAELHLEQIIDLIKAAHANGQDVARVHSGDPSLYGAIGEQIRHLRELG IPFQIIPGVTAVAACAALLEAELTLPDIAQSVILTRYADKTSMPAGEDFDSLARHGTTMAIHLGVNHLDKIVAELLPHYGADCPIAVVHRATWPDQDWVV GTLSDIADKVTAKGFRRTALIVVGRVLASDSFSESSLYRAGHAHLYRPS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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