Strain | Pseudomonas fluorescens strain AU10973 Contig_28, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCCAAGCCCCGGGGCTTTCACCTGGTGACCGAGGAGTTGCTGGCCGGCTTGCCTGAATTGAAGGCCTGTCGCGTGGGCCTGTTGCATTTGTGGCTGCAG CACACCTCGGCCTCGTTGACCGTCAACGAGAATGCCGACCCGGCGGTTCGCCGTGACTTCGAGCGTTATTTCAACTCGCTGGTGCCGCAAGGCCGCGCAG GGTTCGAACATAACGACGAAGGTCCGGATGACCTGCCGGCGCACTTCAAGGCCAGTCTCCTGGGCTGCCAGCTGAGTTTGCCGGTGAAGGCCGGCCGCTT GGCGATGGGGACCTGGCAAGGTGTTTATCTGGGCGAGCACCGTGATCATGGCGGTGCTCGTAAAGTCCTCGCCACCTTGCACGGTGATGGGGCATAAGCC ACTGGTTATCCAGTGGATGTTGATTTTTTTCCAGCAACCGTCGACAGAGGGTGAAGCTGGGCTATAACTAATCTGCTTTTCGCAAGTCATGAGGTAGAAC
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DNA Sequence for Gene |
>MZ33_RS26225
ATGAGCGACGATGATCTGGAAAACGACGAACTGGAAGTAGGTGACGAAGACGACACCGAAGAAGGTCTTGAAGCGGCGGCGGAAGACGTTGCTGACGACG ACGGTGGCGATGATGCACCGGTTCCGGCTGCCAAGGGCAAAGCCAAGGCGGCTGTGTCGGTAGATGAATTGCCGAGCGTTGAGGCCAAGAACAAAGAGCG TGATGCCCTGGCCCGTGCGATGGAAGAGTTCCTCGCTAAAGGCGGCAAAGTGCAGGAAGTCGAGGCTAATGTGGTCGCAGACCCACCGAAGAAGCCGGAC AACAAGTACGGCAGCCGACCTATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGTCAGTCACCTGCTTGTAGGAAAAGCCCGCCGTCGCTGCGGGCTTTTTCATGCCTGAAACAAATTCTCAAGCTTCACCCCCTATCAACGTGGGAGCGGG CTTGATCCCACTTATTTTGATCTTCGGCGTTACTGCCAGCTCTGCAGCAAGGGCGGCAACTCGTTCAGGCTACGAATCTCTGCATCCGGGCGTTTGTGCC CTTCCCACACCTTGCCCGTCGGGTTGAACCACACTGCCCGCAGCCCCGCCTGCTGCGCCCCGGCGATGTCATCCCCGGGATGATCGCCAATATGCACCGC CGCACTGGCATCCACGCCACCACGCTGCAACGCCTCCTGAAACAACCGCGCATCCGGCTTGGCGATGCCGATATCTTCAGCGCGCAAGGCAAAGTGAAAG TAATCCGCCAGGCCTACACGCTGCACATCGGCATTGCCGTTGGTGATCACCCCCAGCAAAAAGTGCTGGCGCAGGGCTTGCAGCATCGGCTCGGCTTCCG
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Amino Acid Sequence |
>hypothetical protein
MSDDDLENDELEVGDEDDTEEGLEAAAEDVADDDGGDDAPVPAAKGKAKAAVSVDELPSVEAKNKERDALARAMEEFLAKGGKVQEVEANVVADPPKKPD NKYGSRPI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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