Pseudomonas aeruginosa PA7, PSPA7_1934 (edd)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009255 Entner-Doudoroff pathway through 6-phosphogluconate
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_02094
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016836 hydro-lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00920
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004456 phosphogluconate dehydratase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_02094
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Carbon compound catabolism Other PA7 genes in this class
Energy metabolism Other PA7 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pap01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pap01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc L-isoleucine biosynthesis II InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pap01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc L-isoleucine biosynthesis III InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pap00030 Pentose phosphate pathway 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc L-isoleucine biosynthesis IV InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc pyruvate fermentation to isobutanol (engineered) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_02094 Phosphogluconate dehydratase [edd]. IPR004786 6-phosphogluconate dehydratase 1 601 58.976616
SUPERFAMILY SSF143975 IlvD/EDD N-terminal domain-like IPR037237 IlvD/EDD, N-terminal domain 1 418 0.0
Pfam PF00920 Dehydratase family IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase 66 597 0.0
NCBIfam TIGR01196 JCVI: phosphogluconate dehydratase IPR004786 6-phosphogluconate dehydratase 2 601 0.0
PANTHER PTHR43661 D-XYLONATE DEHYDRATASE - - 24 601 0.0
Gene3D G3DSA:3.50.30.80 - IPR042096 Dihydroxy-acid dehydratase, C-terminal 419 568 9.5E-52
SUPERFAMILY SSF52016 LeuD/IlvD-like - - 419 600 3.92E-57

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.