Pseudomonas aeruginosa PA7, PSPA7_1726

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01844
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015562 efflux transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01844
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0019867 outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01844
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01844 JCVI: TolC family outer membrane protein IPR010130 Type I secretion outer membrane protein, TolC 20 437 3.6E-113
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 24 211 3.0E-19
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 238 423 3.9E-29
Gene3D G3DSA:1.20.1600.10 Outer membrane efflux proteins (OEP) - - 24 439 2.0E-72
Coils Coil Coil - - 141 161 -
Coils Coil Coil - - 248 268 -
SUPERFAMILY SSF56954 Outer membrane efflux proteins (OEP) - - 22 437 7.72E-79
PANTHER PTHR30026 OUTER MEMBRANE PROTEIN TOLC - - 3 436 1.9E-84

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.