Pseudomonas aeruginosa PA7, PSPA7_1625
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TACCTGCAGGCGCTGGCTCCTACCCGCGGCAAGGACGGCGGCGAGGCGCCGAAGGTCGACGTGGCGCTGCTGACCGATAGCGGCTATGCGCGACGCAGCC GCCTCGACTTTCTCTCCAACATCGCCGATCGCGGCACCGGCACGGTCAGGGTGCGCGCCGTGGTGGACAACCAGGACGGGCAACTGACTCCGGGGCTGTT CGCCAAGGTCAGGCTGGAGACCGGAAAGCCCCGCGAACAGGTGCTGGTCGCCGACCATTCGATCGGCACCGACCAGGGCCGGCGCTACGTGCTGGTGGTC GGCGAGGGCGACCGCACCCAGTACCGCCCCGTCGAACTGGGGCCGCTGGTCGACGGCCTGCGTGTCGTGCGCCAGGGCCTGCAGCCGGGCGAGCGGATCG TCGTCAAGGGCCTGGTGCGCCCGGACATGCAGATCACCCCGCGCCTGGCGGAAATCGATGGCACGCCGGTGGAGTTGGCGCCGACCGTGGGGGCTGCGCA
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| DNA Sequence for Gene |
>PSPA7_1625
ATGAACTTCCCACGCTTCTTCATCGATCGGCCGATCTTCGCCATCGTGCTCTCGGTATTGATGATGATCGGCGGCATCGTCTCGTTCTTCCAACTGCCGC TGAGCGAGTACCCGGCGGTGACGCCGCCCACCGTGCAGGTGACCACCGCCTACCCGGGGGCCAACCCCGAGGTCATCGCGGAAACCGTGGCGACCCCGCT GGAGCAGGCGATCACCGGCGTCGAGGGGATGCTCTACATGTCCTCGCAGTCGGCGACCGATGGGCGGCTGATCCTGACCATCACCTTCGACCAGCACGTG GATCCCGACATGGCCCAGATCCAGGTGCAGAACCGCGTCTCGCGGGTGCTCTCGCGCCTGCCCGAGGAGGTGCAGCGGCAGGGGGTGGTGACCCAGAAGA CGTCGCCGGACATCCTGATGGTGGTGCACCTGCTGTCGCCGGAAAAGCGCTACGACCCGCTGTACATCTCCAACTATGCCTACCTCCAGGTGCGCGACGA ACTGCTGCGCCTGCCGGGCATCAGCGATGTGGTGGTGTGGGGCGCCGGCGAGTACAGCATGCGCCTGTGGCTCGACCCCGACCTGATCGCCGCCCGCGGG TTGACCGCGGGCGAGGTGATCGCCGCGGTGCGCGAGCAGAACGTCCAGGTGGCGGCCGGCTCGGTCGGCCAGGCGCCGGACTCCACCGCGGCCTTCCAGG TGACGGTCAACACCCTCGGGCGTTTGACCGACGAGGAGCAGTTCGGCGACATCATCGTCCGCACCGGCGCCGACGGCCAGGTCACGCGCCTGCGCGAAGT CGCGCGGATCGAGATGGGGGGCGACGCCTACGCGCTGCGCAGCCTGCTCGATGGCGAGCCGGCGGTCGCCTTGCAGATCATCCAGAGCCCGGGGGCCAAC GCGCTGGACGTGGCCGAAGCGGTGCGCGGCACCGTGGCGCGGCTCGAAGGCAACTTCCCGGCCGGGATCAGCGCGCGGATCGCCTACGACCCGACGGTAT TCGTCCGGGCCTCCCTGCAGACGGTGGCCACCACCCTGCTGGAGGCGATCCTGCTGGTGGTGATCGTGGTGGTGGTGTTCCTGCGCAGCTGGCGGGCCTC GCTGATTCCCCTGCTGGCGGTGCCGGTGTCGCTGGTCGGTACCTTCGCCGTCATGCACCTGATGGGCTTCTCGCTGAATACCCTGTCGCTGTTCGGGCTG GTGCTGTCGATCGGTATCGTCGTCGACGACGCGATCGTCGTGGTGGAGAACGTCGAGCGCCATATCGAGAACGGCGAGCCGCCGCTGCAGGCTGCGCGGC GCGCGATGGAAGAGGTGACCGGGCCGATCGTGGCGATCACCTCGGTGCTGGCGGCGGTGTTCATCCCCACCGCCTTCCTCAGTGGTCTGCAGGGCGAGTT CTACCGGCAGTTCGCCCTGACCATCGCCATCTCGACCATTCTCTCGGCGATCAACTCGCTGACCCTCAGCCCGGCGCTGGCCGGCCTGCTGCTGCGTCCG CGCCAGGGTGGGCATGCGGCGTCGCGCCCGGGCCGGCTCGGGGGCTGGCTCCAGGCCCTCGGCCGACCGTTGCGCAACGCGCCCGACGCCTATGGCAATG CGGTGCGCCGGGTGGTGCGGGTCAGCGGCCTGGCGCTGCTGGTCTACGGCGGCCTGCTCGGCCTGACCTGGTTCGGTTTCCAGGCGGTGCCGCCGGGCTT CGTGCCGATGCAGGACAAGTACTACCTGGTCGGCATCGCCCAATTGCCGAACGGAGCGGCGCTGGACCGCACCGATGCGGTGGTCAGGCAGATGTCGCGG ATCGGCCTGGACGAGCCGGGGGTCGAGAGCGTGGTGGCCTTCCCGGGCCTGTCGGTCAATGGCTTCGTCAACGTGCCGAACGCCGCGGTGATGTTCTTCA TGCTCGACCCGTTCGAGGCGCGCACCTCCGACGAACTCAGCGCGGTGGCCATCGCCGGGCGCCTGCAGGCGAAGTTCGCCAGCATTCCCGACGGTTTCCT CGGCGTGTTCCCGCCGCCTCCGGTCCCGGGCCTGGGGACCATCGGCGGCTTCAAGATGCAGGTCGAGGATCGCGCTGGCGCCGGCCTGGAAGCCCTGGCC AGGCACACGCAGGTGCTCATGATGAAGGCCACCGAGTCCGGACAGCTCGGTGGCCTGATGAGCAGCTTCGACATCAACGCCCCGCAGCTCGAGGTGGCGA TCGACCGCACCAAGGTGAAGAGCCAGGGTGTGCAGCTGGCCGACGTGTTCGAGGCGCTGCAGGTCTACCTCGGCTCGCTGTACATCAACGACTTCAACCG CTTCGGCCGCACCTACAAGGTCACCGCCCAGGCCGATGCGCCGCACCGCATGCAGGCCGAGGCGATCGGCCGGCTACAGGTGCGCAACGCGGCCGGGGCG ATGCTGCCGCTTTCCTCGTTCGTTACCGTCACGCCGGGCTCCGGCCCGGACCGGGTGATCCACTACAACGGTTATCCGTCGGCAGACATCAGTGGCGGCG CGCTCCCGGGCGTCAGTTCCGGACAGGCGGTGGCGCTGATGGAGCGCCTGGCCGGCGAGGTGTTGCCGGAGGGCATGACCTTCGAATGGACCGACCTGAC CTACCAGCAGAAGCTGGCGGGCAATAGCGCGCTGTTCATCTTCCCGCTCTGTGTACTGCTGGCCTATCTGATCCTCGCCGCGCAGTACAACAGCTGGCTG TTGCCCCTGGCGGTGCTGCTGATCGTGCCGATGTGCCTGCTCAGCGCGATCGCCGGGGTCTGGCTGGTGGGCGGCGACAACAACGTGTTCGTCCAGATCG GGCTGGTGGTGCTGGTCGGCCTGGCGGCCAAGAACGCCATCCTCATCGTCGAGTTCGCCCGCGCGCTGGAAGCCCGGGGCGCCGCCACGCTGGAGGCGGT GGTCGAGGCGTGTCGCCTGCGCCTGCGGCCGATCCTGATGACCTCGCTGGCCTTCATCGCCGGCGTGGTGCCGCTGGTGATGGCCAGCGGCGCCGGGGCG GAGATGCGCCAGGCGATGGGGGTGGCGGTGTTCGCCGGAATGCTCGGGGTGACGCTGTTCGGCCTGTTCCTGACCCCGGTGTTCTACGTCCTGGTCCGTG CGCTGGCGCTACGCCTGGAGCGGCGTCGCGGCTCCGGCCAGGCTCATCTGCAGGAGAGCGCGTCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGGCACTTCCGTCATCCATTGGCGTCCCTGGGCGCTTTTCTCCTGCTGGCCGGGTGCGCCGCGGTGGGGCCCGACTATTCGCCGCCCGCCAGGGCCGT TCCGGCCAGCTTCGGCGCCAGCGTCGCCGGCCTCGACGGCGCTGGCGTGGAGGTCGCCTGGTGGCGCGGGCTCGATGAGCCGGCGCTGGTAGAGCTGATC CAGCGCGCGCTGGCGGCGAACCACGACATCGCCCTGGCCGCCGCGCGCCTGGACGAGGCGAAGGCGTTGCTGCGCGAGAGCCGCCAGGAGTTCCTGCCGC GCGGCGGACCGGCGTTCGACTACCAGAACCGGCGCCGTGGCGAGGTGGAGACGCCGAGCGGAGAGCCGCGCGACATCGAGACCTATCGTGGCGCGCTGGA TGCCGCCTGGGAGATCGACCTGTTCGGCCGCGTGCGGCGTTCGGTGGAGGCCGCCGAGGCCCAGGCGGGATCCCGCCAGGCGTTGCTGCGCAACGTGCAG
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| Amino Acid Sequence |
>RND efflux transporter
MNFPRFFIDRPIFAIVLSVLMMIGGIVSFFQLPLSEYPAVTPPTVQVTTAYPGANPEVIAETVATPLEQAITGVEGMLYMSSQSATDGRLILTITFDQHV DPDMAQIQVQNRVSRVLSRLPEEVQRQGVVTQKTSPDILMVVHLLSPEKRYDPLYISNYAYLQVRDELLRLPGISDVVVWGAGEYSMRLWLDPDLIAARG LTAGEVIAAVREQNVQVAAGSVGQAPDSTAAFQVTVNTLGRLTDEEQFGDIIVRTGADGQVTRLREVARIEMGGDAYALRSLLDGEPAVALQIIQSPGAN ALDVAEAVRGTVARLEGNFPAGISARIAYDPTVFVRASLQTVATTLLEAILLVVIVVVVFLRSWRASLIPLLAVPVSLVGTFAVMHLMGFSLNTLSLFGL VLSIGIVVDDAIVVVENVERHIENGEPPLQAARRAMEEVTGPIVAITSVLAAVFIPTAFLSGLQGEFYRQFALTIAISTILSAINSLTLSPALAGLLLRP RQGGHAASRPGRLGGWLQALGRPLRNAPDAYGNAVRRVVRVSGLALLVYGGLLGLTWFGFQAVPPGFVPMQDKYYLVGIAQLPNGAALDRTDAVVRQMSR IGLDEPGVESVVAFPGLSVNGFVNVPNAAVMFFMLDPFEARTSDELSAVAIAGRLQAKFASIPDGFLGVFPPPPVPGLGTIGGFKMQVEDRAGAGLEALA RHTQVLMMKATESGQLGGLMSSFDINAPQLEVAIDRTKVKSQGVQLADVFEALQVYLGSLYINDFNRFGRTYKVTAQADAPHRMQAEAIGRLQVRNAAGA MLPLSSFVTVTPGSGPDRVIHYNGYPSADISGGALPGVSSGQAVALMERLAGEVLPEGMTFEWTDLTYQQKLAGNSALFIFPLCVLLAYLILAAQYNSWL LPLAVLLIVPMCLLSAIAGVWLVGGDNNVFVQIGLVVLVGLAAKNAILIVEFARALEARGAATLEAVVEACRLRLRPILMTSLAFIAGVVPLVMASGAGA EMRQAMGVAVFAGMLGVTLFGLFLTPVFYVLVRALALRLERRRGSGQAHLQESAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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