Pseudomonas aeruginosa PA7, PSPA7_1603

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0042121	alginic acid biosynthetic process	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA3542	ECO:0000249 sequence similarity evidence used in automatic assertion	18524915
Biological Process	GO:0042710	biofilm formation	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA3542	ECO:0000249 sequence similarity evidence used in automatic assertion	16797016
Cellular Component	GO:0009276	Gram-negative-bacterium-type cell wall	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA3542	ECO:0000249 sequence similarity evidence used in automatic assertion	16797016
Molecular Function	GO:0004467	long-chain fatty acid-CoA ligase activity	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA3542	ECO:0000249 sequence similarity evidence used in automatic assertion	16797016
Biological Process	GO:0042121	alginic acid biosynthetic process	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA3542	ECO:0000249 sequence similarity evidence used in automatic assertion	16797016
Molecular Function	GO:0035438	cyclic-di-GMP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF07238	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other PA7 genes in this class Secreted Factors (toxins, enzymes, alginate) Other PA7 genes in this class Cell wall / LPS / capsule Other PA7 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pap02025	Biofilm formation - Pseudomonas aeruginosa	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pap00051	Fructose and mannose metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:2.40.50.100	-	-	-	198	292	3.9E-5
SUPERFAMILY	SSF141371	PilZ domain-like	-	-	10	124	2.35E-10
Pfam	PF13437	HlyD family secretion protein	-	-	262	357	1.0E-9
PANTHER	PTHR30386	MEMBRANE FUSION SUBUNIT OF EMRAB-TOLC MULTIDRUG EFFLUX PUMP	-	-	260	370	2.4E-19
Gene3D	G3DSA:2.40.10.220	predicted glycosyltransferase like domains	-	-	12	122	1.5E-35
Pfam	PF07238	PilZ domain	IPR009875	PilZ domain	16	115	2.2E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.