Strain | Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CAGATCCGCCGCGGCAGCGATTGCCTGGCGGACATCCTCGGCCAGCCGGTGCGCTGTTCCGCCGCCGCCGGCTGGCGCGCCGACGGCCGGGTGGTCGAGG CCAAGCAGCCCTTCGGTTTCCGCTACAACAGCGACTGCCGCGGACGCGGCGCGTTCCGCCCGCGCCTGGCCGACGGCAGCCCCGGCATCCCGCAGGTGCC GGTGAACCTGCCGACCTTCGACGAGGTGGTCGGTCCCGGCCTGCCGCGCGAGGCCTACAACGACTTCATCCTGGAACGCTTCGCCGCTGGGCGCGACAAC GTCTACACCATCCACGCCGAGGTCGAGGGGCTGCTCCTCGCCCCGGCATTCCGCGAACTGCTGCGGCGCGCCGAACGGCGTGGCATCCGCTTCCGCCCGT TGGGCGAACTGCTGCCGGACGATCCACGCAGCCTGCCGCTGGCCGAACTGGTGCGCGGCCGTCTGGCCGGTCGCGAGGGCTGGCTGGGAGTGCGCCAGCC
|
|
DNA Sequence for Gene |
>PSPA7_1589
|arnT
ATGAACCGCCGCCAGACCTGGTCACTGCTGCTGATCGCCTTCGGCCTGTTCTACCTGGTTCCGCTGAGCAACCATGGCCTGTGGATTCCCGACGAGACCC GCTACGCGCAGATCAGCCAGGCGATGCTGCTGGGCGGCGACTGGGTGTCGCCGCACTTCCTCGGCCTGCGCTACTTCGAGAAGCCGGTCGCCGGCTACTG GATGATCGCCCTCGGTCAGGCGGTCTTCGGCGAAAACCTGTTCGGCGTGCGCATCGCCTCGGTCGTCGCCACCGCCCTCAGCGTCCTGCTCGCCTACCTG CTGGCCCGCCGCCTGTGGCGGGACCCGCGCACCAGCCTGGCGTGCGCGCTGCTCTACGCCAGCTTCGGGTTGATCGCCGGGCAGTCCGGCTACGCCAACC TCGACCCTCAATTCACCTTCTGGGTCAACCTGAGCCTGGTGGCGCTGTGGTACGCCCTCGACGCGGGGAGCCGCCGCGCGCGCCTCCTCGGCTGGACCCT GCTCGGCCTCGCCTGCGGCATGGGCTTCCTGACCAAGGGCTTCCTCGCCTGGCTGCTGCCGGTGCTGGTCGCCCTGCCCTACATGCTCTGGCAGCGGCGC TGGCGCGAGCTGCTCGGCTACGGCGCGCTGGCGGTGCTAGTGGCGCTACTCGTCTGCCTGCCCTGGGCGCTCGCCGTGCATGCGCGGGAAGCGGACTACT GGCGATTCTTCTTCTGGCACGAACACATCCGCCGCTTCGCCGGCGAAGATGCCCAGCACTCTCGCCCGTGGTGGTTCTACCTGCCGCTGCTGGCGGTCGC CTGCCTGCCCTGGAGCGGCCTGCTGCCGAGCGCGCTGCGCCAGGCCTGGCACGAGCGGCACCAGCCGCCGGTGGCGTTCCTCGCGCTATGGCTGCTGTTG CCGCTGGCGTTCTTCAGCCTGAGCCGGGGCAAGCTGCCGACCTACATCATGCCCTGCCTGCTGCCGCTGGCGCTGCTCATGGGCCACGCCCTGGTGCAGC GGCTGCGCCAGGCGGACAGCCTCGCGCTGCGCGGCAACGGGCTGCTCAACCTGGGCCTGGCGCTCCTCGCGCTGGCGGCCCTGGCCTACCTGCAACTGCG CAAGCCGGTGTACCAGGAAGAACCCTTCGAGCTGTTCCTGGTCCTGCTGGTGATCGGCGCCTGGGCCGCCGCCGGCCTCGCCCAGTGGCGCTACCCGCTA CGCGCCTGGGCCGCGCCGCTGCTGGCGAGCTGGGTACTGATCGCGCTGCTGCCGGCGGCGATGCCCAACCAGGTGGTGCAGAACAAGACCCCCGACCTGT TCGTCGCCGAACACCTCGACGAACTGACCGGCGCCCGCCATCTGCTGAGCAACGACCTCGGCGCCGCCTCGGCCCTCGCCTGGCGCCTGCGCCGTGGCGA CGTGACGCTCTACGACACGCGCGGCGAGCTGAAGTACGGCCTCTCCTACCCCGAGCACAGCCAGCGCAGCGTGCCCTTGGCAGACATCCGCCAGTGGCTC TGGCGGGCACGCCAGGACGGCTCGGTTGCCGTGCTGCTGCGGATCAACAGCGCTAGCGACCGCTACCAACTGGCGCTGTTGCCGGGCGACGGCGAACGCT ACCGGAACGGCAACCTGGTCCTGGCGGTCCTGCCGCAGGTGCGCCCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCGCCGCGCTGCTGCTCGCCACCCTGCTCATGACCGGCCTCGGCCAGGTTGCGCAGAAGCTCACCGTGGAGCACTGGCGCCTGGTCGCCGCCGACGGCTG GGCGGCGCGCCTGCGCAGTCCGTGGCCGTGGCTGGCGCTGCTCGCCCTCGGACTCGGACTGGCCTGCTGGCTGCTGCTCCTGCAACGGGTGGAAGTCGGC AGCGCCTATCCGATGCTGGCGCTGAACTTCGTCCTGGTCACCCTGGTGGCACGCTTCGTCTTCGATGAGCCGGTGGATCGCCGCCACCTCGCCGGCCTGC TGCTGATCGTCGCCGGCGTGGCCCTGCTCGGAAGGCAGGCATGAACGTGCCGCGCGGCTGGCTGGCGGCCCTGGGCAGCGTGCTGCTGGTCAGCGCCGCC CAGCTCGGCATGCGCTGGGGCATGAGCCGCCTGCCGCTGCCGGAAGCCTGGGCCGGGCAAACGCCGGAGCACGCCGCGCTGCTCGCGGTGGCCCTGGCGG
|
|
Amino Acid Sequence |
>4-amino-4-deoxy-L-arabinose transferase
MNRRQTWSLLLIAFGLFYLVPLSNHGLWIPDETRYAQISQAMLLGGDWVSPHFLGLRYFEKPVAGYWMIALGQAVFGENLFGVRIASVVATALSVLLAYL LARRLWRDPRTSLACALLYASFGLIAGQSGYANLDPQFTFWVNLSLVALWYALDAGSRRARLLGWTLLGLACGMGFLTKGFLAWLLPVLVALPYMLWQRR WRELLGYGALAVLVALLVCLPWALAVHAREADYWRFFFWHEHIRRFAGEDAQHSRPWWFYLPLLAVACLPWSGLLPSALRQAWHERHQPPVAFLALWLLL PLAFFSLSRGKLPTYIMPCLLPLALLMGHALVQRLRQADSLALRGNGLLNLGLALLALAALAYLQLRKPVYQEEPFELFLVLLVIGAWAAAGLAQWRYPL RAWAAPLLASWVLIALLPAAMPNQVVQNKTPDLFVAEHLDELTGARHLLSNDLGAASALAWRLRRGDVTLYDTRGELKYGLSYPEHSQRSVPLADIRQWL WRARQDGSVAVLLRINSASDRYQLALLPGDGERYRNGNLVLAVLPQVRP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|